Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
Rpap1Q80TE0 Mir6538-201ENSMUST00000183713 110 ntBASIC39.28■■■■□ 3.88
Rpap1Q80TE0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Rpap1Q80TE0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC39.24■■■■□ 3.87
Rpap1Q80TE0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
Rpap1Q80TE0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC39.22■■■■□ 3.87
Rpap1Q80TE0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
Rpap1Q80TE0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Rpap1Q80TE0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Rpap1Q80TE0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC39.2■■■■□ 3.87
Rpap1Q80TE0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Rpap1Q80TE0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Rpap1Q80TE0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC39.18■■■■□ 3.86
Rpap1Q80TE0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC39.18■■■■□ 3.86
Rpap1Q80TE0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
Rpap1Q80TE0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC39.15■■■■□ 3.86
Rpap1Q80TE0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Rpap1Q80TE0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Rpap1Q80TE0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC39.14■■■■□ 3.86
Rpap1Q80TE0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Rpap1Q80TE0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Rpap1Q80TE0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
Rpap1Q80TE0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC39.13■■■■□ 3.85
Rpap1Q80TE0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC39.12■■■■□ 3.85
Rpap1Q80TE0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Rpap1Q80TE0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC39.1■■■■□ 3.85
Rpap1Q80TE0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC39.06■■■■□ 3.84
Rpap1Q80TE0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC39.05■■■■□ 3.84
Rpap1Q80TE0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC39.03■■■■□ 3.84
Rpap1Q80TE0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
Rpap1Q80TE0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC39■■■■□ 3.83
Rpap1Q80TE0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Rpap1Q80TE0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Rpap1Q80TE0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC38.97■■■■□ 3.83
Rpap1Q80TE0 Cap2-205ENSMUST00000225824 1634 ntBASIC38.96■■■■□ 3.83
Rpap1Q80TE0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC38.96■■■■□ 3.83
Rpap1Q80TE0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC38.96■■■■□ 3.83
Rpap1Q80TE0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC38.95■■■■□ 3.83
Rpap1Q80TE0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Rpap1Q80TE0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Rpap1Q80TE0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Rpap1Q80TE0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
Rpap1Q80TE0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC38.9■■■■□ 3.82
Rpap1Q80TE0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Rpap1Q80TE0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC38.88■■■■□ 3.81
Rpap1Q80TE0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Rpap1Q80TE0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
Rpap1Q80TE0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
Rpap1Q80TE0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
Rpap1Q80TE0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC38.82■■■■□ 3.81
Rpap1Q80TE0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC38.82■■■■□ 3.81
Rpap1Q80TE0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC38.81■■■■□ 3.8
Rpap1Q80TE0 Gm6345-201ENSMUST00000180378 1691 ntBASIC38.8■■■■□ 3.8
Rpap1Q80TE0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
Rpap1Q80TE0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC38.78■■■■□ 3.8
Rpap1Q80TE0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Rpap1Q80TE0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Rpap1Q80TE0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC38.74■■■■□ 3.79
Rpap1Q80TE0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
Rpap1Q80TE0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC38.72■■■■□ 3.79
Rpap1Q80TE0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC38.71■■■■□ 3.79
Rpap1Q80TE0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Rpap1Q80TE0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC38.7■■■■□ 3.79
Rpap1Q80TE0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
Rpap1Q80TE0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
Rpap1Q80TE0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
Rpap1Q80TE0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC38.68■■■■□ 3.78
Rpap1Q80TE0 Gm6311-201ENSMUST00000073790 878 ntBASIC38.68■■■■□ 3.78
Rpap1Q80TE0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Rpap1Q80TE0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC38.67■■■■□ 3.78
Rpap1Q80TE0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Rpap1Q80TE0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Rpap1Q80TE0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC38.65■■■■□ 3.78
Rpap1Q80TE0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC38.65■■■■□ 3.78
Rpap1Q80TE0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC38.64■■■■□ 3.78
Rpap1Q80TE0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC38.63■■■■□ 3.78
Rpap1Q80TE0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
Rpap1Q80TE0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC38.61■■■■□ 3.77
Rpap1Q80TE0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC38.61■■■■□ 3.77
Rpap1Q80TE0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC38.6■■■■□ 3.77
Rpap1Q80TE0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC38.6■■■■□ 3.77
Rpap1Q80TE0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
Rpap1Q80TE0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
Rpap1Q80TE0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
Rpap1Q80TE0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC38.58■■■■□ 3.77
Rpap1Q80TE0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
Rpap1Q80TE0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC38.58■■■■□ 3.77
Rpap1Q80TE0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC38.58■■■■□ 3.77
Rpap1Q80TE0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
Rpap1Q80TE0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC38.57■■■■□ 3.77
Rpap1Q80TE0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC38.57■■■■□ 3.77
Rpap1Q80TE0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.76
Rpap1Q80TE0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Rpap1Q80TE0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Rpap1Q80TE0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Rpap1Q80TE0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Rpap1Q80TE0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC38.53■■■■□ 3.76
Rpap1Q80TE0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC38.53■■■■□ 3.76
Rpap1Q80TE0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Rpap1Q80TE0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC38.52■■■■□ 3.76
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms