Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vma21Q78T54 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vma21Q78T54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21Q78T54 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21Q78T54 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21Q78T54 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21Q78T54 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21Q78T54 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21Q78T54 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.61■□□□□ 0.73
Vma21Q78T54 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vma21Q78T54 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vma21Q78T54 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vma21Q78T54 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vma21Q78T54 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.59■□□□□ 0.73
Vma21Q78T54 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21Q78T54 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21Q78T54 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21Q78T54 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vma21Q78T54 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vma21Q78T54 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vma21Q78T54 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Vma21Q78T54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vma21Q78T54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vma21Q78T54 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vma21Q78T54 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vma21Q78T54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21Q78T54 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.55■□□□□ 0.72
Vma21Q78T54 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21Q78T54 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21Q78T54 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21Q78T54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21Q78T54 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21Q78T54 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vma21Q78T54 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vma21Q78T54 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vma21Q78T54 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vma21Q78T54 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Vma21Q78T54 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21Q78T54 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Vma21Q78T54 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21Q78T54 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21Q78T54 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vma21Q78T54 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vma21Q78T54 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21Q78T54 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21Q78T54 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vma21Q78T54 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21Q78T54 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Vma21Q78T54 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Vma21Q78T54 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vma21Q78T54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vma21Q78T54 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vma21Q78T54 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vma21Q78T54 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vma21Q78T54 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vma21Q78T54 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vma21Q78T54 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vma21Q78T54 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.46■□□□□ 0.71
Vma21Q78T54 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.45■□□□□ 0.7
Vma21Q78T54 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vma21Q78T54 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vma21Q78T54 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
Vma21Q78T54 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21Q78T54 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21Q78T54 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vma21Q78T54 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21Q78T54 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.42■□□□□ 0.7
Vma21Q78T54 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vma21Q78T54 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vma21Q78T54 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.41■□□□□ 0.7
Vma21Q78T54 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Vma21Q78T54 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vma21Q78T54 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vma21Q78T54 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Vma21Q78T54 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vma21Q78T54 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vma21Q78T54 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.39■□□□□ 0.69
Vma21Q78T54 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vma21Q78T54 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vma21Q78T54 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21Q78T54 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.37■□□□□ 0.69
Vma21Q78T54 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21Q78T54 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21Q78T54 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21Q78T54 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21Q78T54 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms