Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vma21Q78T54 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vma21Q78T54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21Q78T54 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21Q78T54 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vma21Q78T54 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21Q78T54 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21Q78T54 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vma21Q78T54 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.61■□□□□ 0.73
Vma21Q78T54 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vma21Q78T54 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vma21Q78T54 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vma21Q78T54 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vma21Q78T54 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vma21Q78T54 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.59■□□□□ 0.73
Vma21Q78T54 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21Q78T54 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21Q78T54 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vma21Q78T54 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vma21Q78T54 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vma21Q78T54 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vma21Q78T54 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Vma21Q78T54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vma21Q78T54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vma21Q78T54 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vma21Q78T54 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vma21Q78T54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21Q78T54 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.55■□□□□ 0.72
Vma21Q78T54 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21Q78T54 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vma21Q78T54 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21Q78T54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21Q78T54 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vma21Q78T54 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vma21Q78T54 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vma21Q78T54 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vma21Q78T54 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vma21Q78T54 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Vma21Q78T54 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21Q78T54 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Vma21Q78T54 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21Q78T54 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vma21Q78T54 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vma21Q78T54 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vma21Q78T54 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21Q78T54 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21Q78T54 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vma21Q78T54 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vma21Q78T54 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Vma21Q78T54 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Vma21Q78T54 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vma21Q78T54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vma21Q78T54 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vma21Q78T54 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vma21Q78T54 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vma21Q78T54 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vma21Q78T54 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vma21Q78T54 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vma21Q78T54 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.46■□□□□ 0.71
Vma21Q78T54 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.45■□□□□ 0.7
Vma21Q78T54 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vma21Q78T54 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vma21Q78T54 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vma21Q78T54 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
Vma21Q78T54 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21Q78T54 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21Q78T54 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vma21Q78T54 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vma21Q78T54 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.42■□□□□ 0.7
Vma21Q78T54 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vma21Q78T54 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vma21Q78T54 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.41■□□□□ 0.7
Vma21Q78T54 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Vma21Q78T54 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vma21Q78T54 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vma21Q78T54 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vma21Q78T54 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Vma21Q78T54 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vma21Q78T54 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vma21Q78T54 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.39■□□□□ 0.69
Vma21Q78T54 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vma21Q78T54 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vma21Q78T54 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21Q78T54 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.37■□□□□ 0.69
Vma21Q78T54 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vma21Q78T54 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21Q78T54 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21Q78T54 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vma21Q78T54 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms