Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24,27■■□□□ 1,48
Ssx9Q6XAS3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Ssx9Q6XAS3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Ssx9Q6XAS3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Ssx9Q6XAS3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24,25■■□□□ 1,47
Ssx9Q6XAS3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24,25■■□□□ 1,47
Ssx9Q6XAS3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Ssx9Q6XAS3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24,22■■□□□ 1,47
Ssx9Q6XAS3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Ssx9Q6XAS3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Ssx9Q6XAS3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24,21■■□□□ 1,47
Ssx9Q6XAS3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24,21■■□□□ 1,47
Ssx9Q6XAS3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24,21■■□□□ 1,47
Ssx9Q6XAS3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Ssx9Q6XAS3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Ssx9Q6XAS3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Ssx9Q6XAS3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24,18■■□□□ 1,46
Ssx9Q6XAS3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24,18■■□□□ 1,46
Ssx9Q6XAS3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Ssx9Q6XAS3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Ssx9Q6XAS3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24,16■■□□□ 1,46
Ssx9Q6XAS3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Ssx9Q6XAS3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Ssx9Q6XAS3 Pcf11-205ENSMUST00000208255 1720 ntBASIC24,15■■□□□ 1,46
Ssx9Q6XAS3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Ssx9Q6XAS3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,45
Ssx9Q6XAS3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Ssx9Q6XAS3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Ssx9Q6XAS3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Ssx9Q6XAS3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24,11■■□□□ 1,45
Ssx9Q6XAS3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24,1■■□□□ 1,45
Ssx9Q6XAS3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24,1■■□□□ 1,45
Ssx9Q6XAS3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24,08■■□□□ 1,45
Ssx9Q6XAS3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,45
Ssx9Q6XAS3 Zfp131-205ENSMUST00000223812 663 ntBASIC24,07■■□□□ 1,44
Ssx9Q6XAS3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24,07■■□□□ 1,44
Ssx9Q6XAS3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Ssx9Q6XAS3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24,05■■□□□ 1,44
Ssx9Q6XAS3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24,05■■□□□ 1,44
Ssx9Q6XAS3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24,04■■□□□ 1,44
Ssx9Q6XAS3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24,04■■□□□ 1,44
Ssx9Q6XAS3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24,04■■□□□ 1,44
Ssx9Q6XAS3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24,04■■□□□ 1,44
Ssx9Q6XAS3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Ssx9Q6XAS3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24,02■■□□□ 1,44
Ssx9Q6XAS3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Ssx9Q6XAS3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24,02■■□□□ 1,44
Ssx9Q6XAS3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Ssx9Q6XAS3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24,01■■□□□ 1,43
Ssx9Q6XAS3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24■■□□□ 1,43
Ssx9Q6XAS3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1,43
Ssx9Q6XAS3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1,43
Ssx9Q6XAS3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1,43
Ssx9Q6XAS3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1,43
Ssx9Q6XAS3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23,99■■□□□ 1,43
Ssx9Q6XAS3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23,98■■□□□ 1,43
Ssx9Q6XAS3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Ssx9Q6XAS3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Ssx9Q6XAS3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23,98■■□□□ 1,43
Ssx9Q6XAS3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23,97■■□□□ 1,43
Ssx9Q6XAS3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23,96■■□□□ 1,43
Ssx9Q6XAS3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23,96■■□□□ 1,43
Ssx9Q6XAS3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23,96■■□□□ 1,43
Ssx9Q6XAS3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23,96■■□□□ 1,43
Ssx9Q6XAS3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Ssx9Q6XAS3 AC157572.2-201ENSMUST00000226970 908 ntBASIC23,95■■□□□ 1,42
Ssx9Q6XAS3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23,95■■□□□ 1,42
Ssx9Q6XAS3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Ssx9Q6XAS3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23,94■■□□□ 1,42
Ssx9Q6XAS3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23,94■■□□□ 1,42
Ssx9Q6XAS3 Gm9397-201ENSMUST00000200125 605 ntBASIC23,94■■□□□ 1,42
Ssx9Q6XAS3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23,94■■□□□ 1,42
Ssx9Q6XAS3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23,93■■□□□ 1,42
Ssx9Q6XAS3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23,92■■□□□ 1,42
Ssx9Q6XAS3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Ssx9Q6XAS3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23,92■■□□□ 1,42
Ssx9Q6XAS3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23,92■■□□□ 1,42
Ssx9Q6XAS3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23,92■■□□□ 1,42
Ssx9Q6XAS3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Ssx9Q6XAS3 Tdp2-203ENSMUST00000223804 1136 ntBASIC23,91■■□□□ 1,42
Ssx9Q6XAS3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23,91■■□□□ 1,42
Ssx9Q6XAS3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23,91■■□□□ 1,42
Ssx9Q6XAS3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23,9■■□□□ 1,42
Ssx9Q6XAS3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23,89■■□□□ 1,41
Ssx9Q6XAS3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Ssx9Q6XAS3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Ssx9Q6XAS3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23,87■■□□□ 1,41
Ssx9Q6XAS3 Gm24970-201ENSMUST00000175582 82 ntBASIC23,87■■□□□ 1,41
Ssx9Q6XAS3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Ssx9Q6XAS3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23,86■■□□□ 1,41
Ssx9Q6XAS3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23,85■■□□□ 1,41
Ssx9Q6XAS3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23,85■■□□□ 1,41
Ssx9Q6XAS3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23,84■■□□□ 1,41
Ssx9Q6XAS3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23,83■■□□□ 1,41
Ssx9Q6XAS3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23,83■■□□□ 1,41
Ssx9Q6XAS3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23,83■■□□□ 1,41
Ssx9Q6XAS3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23,83■■□□□ 1,41
Ssx9Q6XAS3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23,83■■□□□ 1,41
Ssx9Q6XAS3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23,82■■□□□ 1,4
Ssx9Q6XAS3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23,82■■□□□ 1,4
Retrieved 100 of 76,532 protein–RNA pairs in 16,9 ms