Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tra2aQ6PFR5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tra2aQ6PFR5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Tra2aQ6PFR5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tra2aQ6PFR5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
Tra2aQ6PFR5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.47■■□□□ 1.51
Tra2aQ6PFR5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tra2aQ6PFR5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tra2aQ6PFR5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.44■■□□□ 1.5
Tra2aQ6PFR5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.43■■□□□ 1.5
Tra2aQ6PFR5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tra2aQ6PFR5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tra2aQ6PFR5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tra2aQ6PFR5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tra2aQ6PFR5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Tra2aQ6PFR5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tra2aQ6PFR5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.41■■□□□ 1.5
Tra2aQ6PFR5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tra2aQ6PFR5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.4■■□□□ 1.5
Tra2aQ6PFR5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Tra2aQ6PFR5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tra2aQ6PFR5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
Tra2aQ6PFR5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.38■■□□□ 1.49
Tra2aQ6PFR5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tra2aQ6PFR5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.37■■□□□ 1.49
Tra2aQ6PFR5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.36■■□□□ 1.49
Tra2aQ6PFR5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Tra2aQ6PFR5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Tra2aQ6PFR5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.35■■□□□ 1.49
Tra2aQ6PFR5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.34■■□□□ 1.49
Tra2aQ6PFR5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tra2aQ6PFR5 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.34■■□□□ 1.49
Tra2aQ6PFR5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.33■■□□□ 1.49
Tra2aQ6PFR5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tra2aQ6PFR5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Tra2aQ6PFR5 Mir6538-201ENSMUST00000183713 110 ntBASIC24.32■■□□□ 1.48
Tra2aQ6PFR5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tra2aQ6PFR5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tra2aQ6PFR5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Tra2aQ6PFR5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tra2aQ6PFR5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Tra2aQ6PFR5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.28■■□□□ 1.48
Tra2aQ6PFR5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.28■■□□□ 1.48
Tra2aQ6PFR5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Tra2aQ6PFR5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Tra2aQ6PFR5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tra2aQ6PFR5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Tra2aQ6PFR5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Tra2aQ6PFR5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tra2aQ6PFR5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tra2aQ6PFR5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tra2aQ6PFR5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tra2aQ6PFR5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.22■■□□□ 1.47
Tra2aQ6PFR5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Tra2aQ6PFR5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Tra2aQ6PFR5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Tra2aQ6PFR5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.19■■□□□ 1.46
Tra2aQ6PFR5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tra2aQ6PFR5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tra2aQ6PFR5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tra2aQ6PFR5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tra2aQ6PFR5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tra2aQ6PFR5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.16■■□□□ 1.46
Tra2aQ6PFR5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Tra2aQ6PFR5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tra2aQ6PFR5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Tra2aQ6PFR5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.14■■□□□ 1.45
Tra2aQ6PFR5 Particl-201ENSMUST00000205370 1560 ntBASIC24.14■■□□□ 1.45
Tra2aQ6PFR5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tra2aQ6PFR5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tra2aQ6PFR5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Tra2aQ6PFR5 Gm11175-201ENSMUST00000116172 543 ntBASIC24.13■■□□□ 1.45
Tra2aQ6PFR5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Tra2aQ6PFR5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tra2aQ6PFR5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tra2aQ6PFR5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Tra2aQ6PFR5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Tra2aQ6PFR5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Tra2aQ6PFR5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tra2aQ6PFR5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Tra2aQ6PFR5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tra2aQ6PFR5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tra2aQ6PFR5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.09■■□□□ 1.45
Tra2aQ6PFR5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tra2aQ6PFR5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tra2aQ6PFR5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Tra2aQ6PFR5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tra2aQ6PFR5 Gm30023-201ENSMUST00000197970 889 ntBASIC24.07■■□□□ 1.44
Tra2aQ6PFR5 Gm6311-201ENSMUST00000073790 878 ntBASIC24.07■■□□□ 1.44
Tra2aQ6PFR5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tra2aQ6PFR5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Tra2aQ6PFR5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Tra2aQ6PFR5 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.05■■□□□ 1.44
Tra2aQ6PFR5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tra2aQ6PFR5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tra2aQ6PFR5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tra2aQ6PFR5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tra2aQ6PFR5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tra2aQ6PFR5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.03■■□□□ 1.44
Tra2aQ6PFR5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms