Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
ShbQ6PD21 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
ShbQ6PD21 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.64■■■□□ 2.02
ShbQ6PD21 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ShbQ6PD21 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ShbQ6PD21 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ShbQ6PD21 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
ShbQ6PD21 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ShbQ6PD21 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ShbQ6PD21 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.61■■■□□ 2.01
ShbQ6PD21 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
ShbQ6PD21 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ShbQ6PD21 Gm6311-201ENSMUST00000073790 878 ntBASIC27.61■■■□□ 2.01
ShbQ6PD21 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.6■■■□□ 2.01
ShbQ6PD21 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ShbQ6PD21 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.6■■■□□ 2.01
ShbQ6PD21 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.57■■■□□ 2
ShbQ6PD21 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.57■■■□□ 2
ShbQ6PD21 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.57■■■□□ 2
ShbQ6PD21 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ShbQ6PD21 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
ShbQ6PD21 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.55■■■□□ 2
ShbQ6PD21 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ShbQ6PD21 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ShbQ6PD21 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.53■■■□□ 2
ShbQ6PD21 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ShbQ6PD21 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ShbQ6PD21 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
ShbQ6PD21 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.53■■■□□ 2
ShbQ6PD21 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ShbQ6PD21 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.52■■■□□ 2
ShbQ6PD21 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.52■■■□□ 2
ShbQ6PD21 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.52■■■□□ 2
ShbQ6PD21 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.5■■□□□ 1.99
ShbQ6PD21 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
ShbQ6PD21 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.48■■□□□ 1.99
ShbQ6PD21 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.48■■□□□ 1.99
ShbQ6PD21 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
ShbQ6PD21 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ShbQ6PD21 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
ShbQ6PD21 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ShbQ6PD21 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.47■■□□□ 1.99
ShbQ6PD21 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ShbQ6PD21 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.46■■□□□ 1.99
ShbQ6PD21 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ShbQ6PD21 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ShbQ6PD21 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ShbQ6PD21 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ShbQ6PD21 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ShbQ6PD21 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ShbQ6PD21 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
ShbQ6PD21 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.42■■□□□ 1.98
ShbQ6PD21 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ShbQ6PD21 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ShbQ6PD21 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
ShbQ6PD21 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.39■■□□□ 1.98
ShbQ6PD21 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.38■■□□□ 1.97
ShbQ6PD21 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
ShbQ6PD21 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ShbQ6PD21 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ShbQ6PD21 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ShbQ6PD21 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ShbQ6PD21 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
ShbQ6PD21 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ShbQ6PD21 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShbQ6PD21 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ShbQ6PD21 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShbQ6PD21 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ShbQ6PD21 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ShbQ6PD21 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ShbQ6PD21 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ShbQ6PD21 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ShbQ6PD21 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ShbQ6PD21 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ShbQ6PD21 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.27■■□□□ 1.96
ShbQ6PD21 Gm12366-201ENSMUST00000121722 873 ntBASIC27.27■■□□□ 1.96
ShbQ6PD21 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.27■■□□□ 1.96
ShbQ6PD21 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.27■■□□□ 1.96
ShbQ6PD21 Gm5786-201ENSMUST00000085368 882 ntBASIC27.27■■□□□ 1.96
ShbQ6PD21 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ShbQ6PD21 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ShbQ6PD21 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ShbQ6PD21 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ShbQ6PD21 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ShbQ6PD21 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ShbQ6PD21 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ShbQ6PD21 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ShbQ6PD21 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ShbQ6PD21 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
ShbQ6PD21 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ShbQ6PD21 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
ShbQ6PD21 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ShbQ6PD21 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ShbQ6PD21 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ShbQ6PD21 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ShbQ6PD21 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ShbQ6PD21 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
ShbQ6PD21 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.19■■□□□ 1.94
ShbQ6PD21 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ShbQ6PD21 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms