Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trp53rkaQ5U452 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53rkaQ5U452 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Trp53rkaQ5U452 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53rkaQ5U452 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53rkaQ5U452 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53rkaQ5U452 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53rkaQ5U452 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.91■□□□□ 0.62
Trp53rkaQ5U452 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53rkaQ5U452 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trp53rkaQ5U452 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trp53rkaQ5U452 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trp53rkaQ5U452 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trp53rkaQ5U452 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.85■□□□□ 0.61
Trp53rkaQ5U452 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Trp53rkaQ5U452 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trp53rkaQ5U452 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trp53rkaQ5U452 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trp53rkaQ5U452 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trp53rkaQ5U452 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trp53rkaQ5U452 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trp53rkaQ5U452 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Mipep-204ENSMUST00000225043 1548 ntBASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trp53rkaQ5U452 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trp53rkaQ5U452 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trp53rkaQ5U452 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trp53rkaQ5U452 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trp53rkaQ5U452 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.77■□□□□ 0.6
Trp53rkaQ5U452 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trp53rkaQ5U452 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trp53rkaQ5U452 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trp53rkaQ5U452 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trp53rkaQ5U452 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trp53rkaQ5U452 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trp53rkaQ5U452 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trp53rkaQ5U452 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trp53rkaQ5U452 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trp53rkaQ5U452 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trp53rkaQ5U452 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Trp53rkaQ5U452 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trp53rkaQ5U452 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms