Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ubr3Q5U430 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr3Q5U430 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr3Q5U430 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ubr3Q5U430 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ubr3Q5U430 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.08■■■□□ 2.57
Ubr3Q5U430 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ubr3Q5U430 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ubr3Q5U430 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.07■■■□□ 2.56
Ubr3Q5U430 Cap2-205ENSMUST00000225824 1634 ntBASIC31.07■■■□□ 2.56
Ubr3Q5U430 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.06■■■□□ 2.56
Ubr3Q5U430 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Ubr3Q5U430 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.05■■■□□ 2.56
Ubr3Q5U430 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ubr3Q5U430 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ubr3Q5U430 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.02■■■□□ 2.56
Ubr3Q5U430 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Ubr3Q5U430 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Ubr3Q5U430 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ubr3Q5U430 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.97■■■□□ 2.55
Ubr3Q5U430 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.94■■■□□ 2.54
Ubr3Q5U430 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ubr3Q5U430 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ubr3Q5U430 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.91■■■□□ 2.54
Ubr3Q5U430 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ubr3Q5U430 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ubr3Q5U430 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Ubr3Q5U430 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ubr3Q5U430 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ubr3Q5U430 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.86■■■□□ 2.53
Ubr3Q5U430 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ubr3Q5U430 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ubr3Q5U430 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ubr3Q5U430 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ubr3Q5U430 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ubr3Q5U430 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ubr3Q5U430 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ubr3Q5U430 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ubr3Q5U430 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.82■■■□□ 2.52
Ubr3Q5U430 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ubr3Q5U430 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ubr3Q5U430 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ubr3Q5U430 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ubr3Q5U430 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Ubr3Q5U430 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Ubr3Q5U430 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ubr3Q5U430 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ubr3Q5U430 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.78■■■□□ 2.52
Ubr3Q5U430 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.77■■■□□ 2.52
Ubr3Q5U430 Gm6311-201ENSMUST00000073790 878 ntBASIC30.77■■■□□ 2.52
Ubr3Q5U430 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ubr3Q5U430 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.76■■■□□ 2.52
Ubr3Q5U430 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ubr3Q5U430 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ubr3Q5U430 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Ubr3Q5U430 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ubr3Q5U430 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.74■■■□□ 2.51
Ubr3Q5U430 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Ubr3Q5U430 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.73■■■□□ 2.51
Ubr3Q5U430 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Ubr3Q5U430 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ubr3Q5U430 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ubr3Q5U430 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.72■■■□□ 2.51
Ubr3Q5U430 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Ubr3Q5U430 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Ubr3Q5U430 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.7■■■□□ 2.51
Ubr3Q5U430 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.7■■■□□ 2.51
Ubr3Q5U430 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
Ubr3Q5U430 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Ubr3Q5U430 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Ubr3Q5U430 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ubr3Q5U430 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ubr3Q5U430 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ubr3Q5U430 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ubr3Q5U430 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ubr3Q5U430 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ubr3Q5U430 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Ubr3Q5U430 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Ubr3Q5U430 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ubr3Q5U430 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ubr3Q5U430 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ubr3Q5U430 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ubr3Q5U430 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ubr3Q5U430 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.63■■■□□ 2.49
Ubr3Q5U430 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ubr3Q5U430 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ubr3Q5U430 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.61■■■□□ 2.49
Ubr3Q5U430 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Ubr3Q5U430 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Ubr3Q5U430 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ubr3Q5U430 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
Ubr3Q5U430 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ubr3Q5U430 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ubr3Q5U430 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ubr3Q5U430 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Ubr3Q5U430 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ubr3Q5U430 Particl-201ENSMUST00000205370 1560 ntBASIC30.58■■■□□ 2.49
Ubr3Q5U430 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ubr3Q5U430 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ubr3Q5U430 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms