Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Herc2Q4U2R1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.48■□□□□ 0.07
Herc2Q4U2R1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.48■□□□□ 0.07
Herc2Q4U2R1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Herc2Q4U2R1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Herc2Q4U2R1 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.46■□□□□ 0.06
Herc2Q4U2R1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Herc2Q4U2R1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Herc2Q4U2R1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Herc2Q4U2R1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Herc2Q4U2R1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Herc2Q4U2R1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.44■□□□□ 0.06
Herc2Q4U2R1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Herc2Q4U2R1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.43■□□□□ 0.06
Herc2Q4U2R1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Herc2Q4U2R1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Herc2Q4U2R1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.43■□□□□ 0.06
Herc2Q4U2R1 Gm9806-201ENSMUST00000051080 552 ntBASIC15.43■□□□□ 0.06
Herc2Q4U2R1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Herc2Q4U2R1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Herc2Q4U2R1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Herc2Q4U2R1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Herc2Q4U2R1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Herc2Q4U2R1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.41■□□□□ 0.06
Herc2Q4U2R1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.41■□□□□ 0.06
Herc2Q4U2R1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Herc2Q4U2R1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Serp2-204ENSMUST00000228055 705 ntBASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Scarna2-201ENSMUST00000157560 414 ntBASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Herc2Q4U2R1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Herc2Q4U2R1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Herc2Q4U2R1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.39■□□□□ 0.05
Herc2Q4U2R1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Herc2Q4U2R1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Herc2Q4U2R1 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.38■□□□□ 0.05
Herc2Q4U2R1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Herc2Q4U2R1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.38■□□□□ 0.05
Herc2Q4U2R1 Gm11687-201ENSMUST00000118911 886 ntBASIC15.38■□□□□ 0.05
Herc2Q4U2R1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Herc2Q4U2R1 Gm7332-201ENSMUST00000118351 454 ntBASIC15.37■□□□□ 0.05
Herc2Q4U2R1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Herc2Q4U2R1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
Herc2Q4U2R1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Herc2Q4U2R1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Herc2Q4U2R1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Herc2Q4U2R1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Herc2Q4U2R1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.35■□□□□ 0.05
Herc2Q4U2R1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Herc2Q4U2R1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Herc2Q4U2R1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.33■□□□□ 0.05
Herc2Q4U2R1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Herc2Q4U2R1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.33■□□□□ 0.04
Herc2Q4U2R1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Herc2Q4U2R1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
Herc2Q4U2R1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Herc2Q4U2R1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.32■□□□□ 0.04
Herc2Q4U2R1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Herc2Q4U2R1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Herc2Q4U2R1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Herc2Q4U2R1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Herc2Q4U2R1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.3■□□□□ 0.04
Herc2Q4U2R1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Herc2Q4U2R1 Gm15546-201ENSMUST00000122095 826 ntBASIC15.29■□□□□ 0.04
Herc2Q4U2R1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Herc2Q4U2R1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Herc2Q4U2R1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.29■□□□□ 0.04
Herc2Q4U2R1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Herc2Q4U2R1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Herc2Q4U2R1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Herc2Q4U2R1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.27■□□□□ 0.04
Herc2Q4U2R1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Herc2Q4U2R1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Herc2Q4U2R1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Herc2Q4U2R1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Herc2Q4U2R1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Herc2Q4U2R1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Herc2Q4U2R1 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.25■□□□□ 0.03
Herc2Q4U2R1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Herc2Q4U2R1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.24■□□□□ 0.03
Herc2Q4U2R1 Gm16437-201ENSMUST00000025669 507 ntBASIC15.24■□□□□ 0.03
Herc2Q4U2R1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Herc2Q4U2R1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.24■□□□□ 0.03
Herc2Q4U2R1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Herc2Q4U2R1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc2Q4U2R1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.23■□□□□ 0.03
Herc2Q4U2R1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.23■□□□□ 0.03
Herc2Q4U2R1 Gm27502-201ENSMUST00000183495 199 ntBASIC15.23■□□□□ 0.03
Herc2Q4U2R1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc2Q4U2R1 Gm14523-201ENSMUST00000117260 558 ntBASIC15.22■□□□□ 0.03
Herc2Q4U2R1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.22■□□□□ 0.03
Herc2Q4U2R1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc2Q4U2R1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms