Protein–RNA interactions for Protein: Q3V0P1

Cpxcr1, CPX chromosomal region candidate gene 1 protein homolog, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpxcr1Q3V0P1 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.09■■□□□ 1.29
Cpxcr1Q3V0P1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cpxcr1Q3V0P1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cpxcr1Q3V0P1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cpxcr1Q3V0P1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cpxcr1Q3V0P1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cpxcr1Q3V0P1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpxcr1Q3V0P1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.06■■□□□ 1.28
Cpxcr1Q3V0P1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cpxcr1Q3V0P1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cpxcr1Q3V0P1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cpxcr1Q3V0P1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cpxcr1Q3V0P1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cpxcr1Q3V0P1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.02■■□□□ 1.28
Cpxcr1Q3V0P1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.01■■□□□ 1.27
Cpxcr1Q3V0P1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cpxcr1Q3V0P1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cpxcr1Q3V0P1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cpxcr1Q3V0P1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cpxcr1Q3V0P1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Cpxcr1Q3V0P1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cpxcr1Q3V0P1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cpxcr1Q3V0P1 Gm9397-201ENSMUST00000200125 605 ntBASIC22.98■■□□□ 1.27
Cpxcr1Q3V0P1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cpxcr1Q3V0P1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cpxcr1Q3V0P1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cpxcr1Q3V0P1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cpxcr1Q3V0P1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.97■■□□□ 1.27
Cpxcr1Q3V0P1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Cpxcr1Q3V0P1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpxcr1Q3V0P1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.95■■□□□ 1.26
Cpxcr1Q3V0P1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpxcr1Q3V0P1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cpxcr1Q3V0P1 Gm45855-201ENSMUST00000212546 880 ntBASIC22.94■■□□□ 1.26
Cpxcr1Q3V0P1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Cpxcr1Q3V0P1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cpxcr1Q3V0P1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cpxcr1Q3V0P1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cpxcr1Q3V0P1 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.91■■□□□ 1.26
Cpxcr1Q3V0P1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cpxcr1Q3V0P1 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.9■■□□□ 1.26
Cpxcr1Q3V0P1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cpxcr1Q3V0P1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cpxcr1Q3V0P1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.89■■□□□ 1.25
Cpxcr1Q3V0P1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cpxcr1Q3V0P1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cpxcr1Q3V0P1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cpxcr1Q3V0P1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cpxcr1Q3V0P1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cpxcr1Q3V0P1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.86■■□□□ 1.25
Cpxcr1Q3V0P1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cpxcr1Q3V0P1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Cpxcr1Q3V0P1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cpxcr1Q3V0P1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cpxcr1Q3V0P1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Cpxcr1Q3V0P1 Gm24970-201ENSMUST00000175582 82 ntBASIC22.84■■□□□ 1.25
Cpxcr1Q3V0P1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cpxcr1Q3V0P1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cpxcr1Q3V0P1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cpxcr1Q3V0P1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Cpxcr1Q3V0P1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Cpxcr1Q3V0P1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Cpxcr1Q3V0P1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cpxcr1Q3V0P1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.82■■□□□ 1.24
Cpxcr1Q3V0P1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.81■■□□□ 1.24
Cpxcr1Q3V0P1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cpxcr1Q3V0P1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cpxcr1Q3V0P1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cpxcr1Q3V0P1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cpxcr1Q3V0P1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpxcr1Q3V0P1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpxcr1Q3V0P1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.79■■□□□ 1.24
Cpxcr1Q3V0P1 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.79■■□□□ 1.24
Cpxcr1Q3V0P1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Cpxcr1Q3V0P1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpxcr1Q3V0P1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.78■■□□□ 1.24
Cpxcr1Q3V0P1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Cpxcr1Q3V0P1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cpxcr1Q3V0P1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cpxcr1Q3V0P1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cpxcr1Q3V0P1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.76■■□□□ 1.23
Cpxcr1Q3V0P1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cpxcr1Q3V0P1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cpxcr1Q3V0P1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Cpxcr1Q3V0P1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cpxcr1Q3V0P1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
Cpxcr1Q3V0P1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Cpxcr1Q3V0P1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cpxcr1Q3V0P1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Cpxcr1Q3V0P1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cpxcr1Q3V0P1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cpxcr1Q3V0P1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cpxcr1Q3V0P1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cpxcr1Q3V0P1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cpxcr1Q3V0P1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cpxcr1Q3V0P1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Cpxcr1Q3V0P1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cpxcr1Q3V0P1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cpxcr1Q3V0P1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.68■■□□□ 1.22
Cpxcr1Q3V0P1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms