Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Col5a2Q3U962 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Col5a2Q3U962 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Col5a2Q3U962 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Col5a2Q3U962 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Col5a2Q3U962 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30,09■■■□□ 2,41
Col5a2Q3U962 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
Col5a2Q3U962 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30,09■■■□□ 2,41
Col5a2Q3U962 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Col5a2Q3U962 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Col5a2Q3U962 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30,07■■■□□ 2,4
Col5a2Q3U962 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30,06■■■□□ 2,4
Col5a2Q3U962 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,05■■■□□ 2,4
Col5a2Q3U962 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Col5a2Q3U962 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Col5a2Q3U962 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30,02■■■□□ 2,4
Col5a2Q3U962 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30,01■■■□□ 2,4
Col5a2Q3U962 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30,01■■■□□ 2,39
Col5a2Q3U962 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Col5a2Q3U962 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29,99■■■□□ 2,39
Col5a2Q3U962 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29,99■■■□□ 2,39
Col5a2Q3U962 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29,97■■■□□ 2,39
Col5a2Q3U962 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29,95■■■□□ 2,39
Col5a2Q3U962 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29,94■■■□□ 2,38
Col5a2Q3U962 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29,94■■■□□ 2,38
Col5a2Q3U962 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Col5a2Q3U962 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Col5a2Q3U962 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Col5a2Q3U962 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29,9■■■□□ 2,38
Col5a2Q3U962 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29,89■■■□□ 2,38
Col5a2Q3U962 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29,88■■■□□ 2,37
Col5a2Q3U962 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Col5a2Q3U962 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29,87■■■□□ 2,37
Col5a2Q3U962 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
Col5a2Q3U962 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29,86■■■□□ 2,37
Col5a2Q3U962 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC29,86■■■□□ 2,37
Col5a2Q3U962 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29,84■■■□□ 2,37
Col5a2Q3U962 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
Col5a2Q3U962 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Col5a2Q3U962 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC29,84■■■□□ 2,37
Col5a2Q3U962 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29,84■■■□□ 2,37
Col5a2Q3U962 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Col5a2Q3U962 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Col5a2Q3U962 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Col5a2Q3U962 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29,82■■■□□ 2,36
Col5a2Q3U962 Gm6345-201ENSMUST00000180378 1691 ntBASIC29,82■■■□□ 2,36
Col5a2Q3U962 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29,81■■■□□ 2,36
Col5a2Q3U962 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Col5a2Q3U962 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Col5a2Q3U962 Gm6658-202ENSMUST00000209493 1885 ntBASIC29,79■■■□□ 2,36
Col5a2Q3U962 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Col5a2Q3U962 Gm6311-201ENSMUST00000073790 878 ntBASIC29,78■■■□□ 2,36
Col5a2Q3U962 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Col5a2Q3U962 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29,77■■■□□ 2,36
Col5a2Q3U962 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29,76■■■□□ 2,35
Col5a2Q3U962 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29,76■■■□□ 2,35
Col5a2Q3U962 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Col5a2Q3U962 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Col5a2Q3U962 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Col5a2Q3U962 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29,74■■■□□ 2,35
Col5a2Q3U962 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29,74■■■□□ 2,35
Col5a2Q3U962 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Col5a2Q3U962 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC29,73■■■□□ 2,35
Col5a2Q3U962 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29,73■■■□□ 2,35
Col5a2Q3U962 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29,72■■■□□ 2,35
Col5a2Q3U962 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29,71■■■□□ 2,35
Col5a2Q3U962 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29,71■■■□□ 2,35
Col5a2Q3U962 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29,7■■■□□ 2,35
Col5a2Q3U962 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC29,7■■■□□ 2,34
Col5a2Q3U962 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
Col5a2Q3U962 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC29,68■■■□□ 2,34
Col5a2Q3U962 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29,67■■■□□ 2,34
Col5a2Q3U962 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29,66■■■□□ 2,34
Col5a2Q3U962 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
Col5a2Q3U962 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Col5a2Q3U962 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29,64■■■□□ 2,33
Col5a2Q3U962 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,33
Col5a2Q3U962 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29,63■■■□□ 2,33
Col5a2Q3U962 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29,62■■■□□ 2,33
Col5a2Q3U962 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29,62■■■□□ 2,33
Col5a2Q3U962 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Col5a2Q3U962 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29,61■■■□□ 2,33
Col5a2Q3U962 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Col5a2Q3U962 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29,6■■■□□ 2,33
Col5a2Q3U962 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Col5a2Q3U962 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Col5a2Q3U962 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC29,59■■■□□ 2,33
Col5a2Q3U962 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Col5a2Q3U962 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC29,59■■■□□ 2,33
Col5a2Q3U962 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Col5a2Q3U962 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Col5a2Q3U962 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29,57■■■□□ 2,32
Col5a2Q3U962 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Col5a2Q3U962 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29,56■■■□□ 2,32
Col5a2Q3U962 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Col5a2Q3U962 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Col5a2Q3U962 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Col5a2Q3U962 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Col5a2Q3U962 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Col5a2Q3U962 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms