Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Cln6Q3U466 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.48■□□□□ 0.87
Cln6Q3U466 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cln6Q3U466 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cln6Q3U466 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.47■□□□□ 0.87
Cln6Q3U466 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cln6Q3U466 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Cln6Q3U466 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.46■□□□□ 0.87
Cln6Q3U466 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cln6Q3U466 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cln6Q3U466 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cln6Q3U466 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cln6Q3U466 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cln6Q3U466 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cln6Q3U466 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cln6Q3U466 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cln6Q3U466 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cln6Q3U466 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cln6Q3U466 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cln6Q3U466 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cln6Q3U466 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cln6Q3U466 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cln6Q3U466 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.42■□□□□ 0.86
Cln6Q3U466 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cln6Q3U466 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cln6Q3U466 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cln6Q3U466 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cln6Q3U466 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.4■□□□□ 0.86
Cln6Q3U466 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cln6Q3U466 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.39■□□□□ 0.85
Cln6Q3U466 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.39■□□□□ 0.85
Cln6Q3U466 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cln6Q3U466 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cln6Q3U466 Gm24804-201ENSMUST00000174982 85 ntBASIC20.38■□□□□ 0.85
Cln6Q3U466 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cln6Q3U466 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cln6Q3U466 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cln6Q3U466 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cln6Q3U466 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cln6Q3U466 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cln6Q3U466 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cln6Q3U466 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cln6Q3U466 Gm16148-201ENSMUST00000119653 893 ntBASIC20.35■□□□□ 0.85
Cln6Q3U466 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cln6Q3U466 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cln6Q3U466 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cln6Q3U466 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cln6Q3U466 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cln6Q3U466 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cln6Q3U466 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cln6Q3U466 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.32■□□□□ 0.84
Cln6Q3U466 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cln6Q3U466 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cln6Q3U466 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cln6Q3U466 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cln6Q3U466 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln6Q3U466 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cln6Q3U466 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln6Q3U466 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln6Q3U466 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cln6Q3U466 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cln6Q3U466 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cln6Q3U466 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cln6Q3U466 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cln6Q3U466 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cln6Q3U466 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cln6Q3U466 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln6Q3U466 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cln6Q3U466 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln6Q3U466 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln6Q3U466 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln6Q3U466 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln6Q3U466 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln6Q3U466 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln6Q3U466 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln6Q3U466 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.24■□□□□ 0.83
Cln6Q3U466 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln6Q3U466 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln6Q3U466 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln6Q3U466 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cln6Q3U466 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln6Q3U466 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln6Q3U466 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln6Q3U466 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cln6Q3U466 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cln6Q3U466 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cln6Q3U466 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cln6Q3U466 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cln6Q3U466 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Cln6Q3U466 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cln6Q3U466 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cln6Q3U466 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cln6Q3U466 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cln6Q3U466 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cln6Q3U466 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cln6Q3U466 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cln6Q3U466 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cln6Q3U466 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cln6Q3U466 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.19■□□□□ 0.82
Cln6Q3U466 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms