Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nhej1Q3KNJ2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nhej1Q3KNJ2 Gm16148-201ENSMUST00000119653 893 ntBASIC25.9■■□□□ 1.74
Nhej1Q3KNJ2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nhej1Q3KNJ2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.9■■□□□ 1.74
Nhej1Q3KNJ2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nhej1Q3KNJ2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nhej1Q3KNJ2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Nhej1Q3KNJ2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.87■■□□□ 1.73
Nhej1Q3KNJ2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Nhej1Q3KNJ2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.85■■□□□ 1.73
Nhej1Q3KNJ2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Nhej1Q3KNJ2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Nhej1Q3KNJ2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Nhej1Q3KNJ2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Nhej1Q3KNJ2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Nhej1Q3KNJ2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nhej1Q3KNJ2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Nhej1Q3KNJ2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Nhej1Q3KNJ2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nhej1Q3KNJ2 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.8■■□□□ 1.72
Nhej1Q3KNJ2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Nhej1Q3KNJ2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Nhej1Q3KNJ2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Nhej1Q3KNJ2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
Nhej1Q3KNJ2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.79■■□□□ 1.72
Nhej1Q3KNJ2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Nhej1Q3KNJ2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Nhej1Q3KNJ2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Nhej1Q3KNJ2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Nhej1Q3KNJ2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Nhej1Q3KNJ2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Nhej1Q3KNJ2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.76■■□□□ 1.71
Nhej1Q3KNJ2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Nhej1Q3KNJ2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Nhej1Q3KNJ2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Nhej1Q3KNJ2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Nhej1Q3KNJ2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Nhej1Q3KNJ2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.75■■□□□ 1.71
Nhej1Q3KNJ2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Nhej1Q3KNJ2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Nhej1Q3KNJ2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Nhej1Q3KNJ2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Nhej1Q3KNJ2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.72■■□□□ 1.71
Nhej1Q3KNJ2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Nhej1Q3KNJ2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Nhej1Q3KNJ2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.71■■□□□ 1.71
Nhej1Q3KNJ2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.69■■□□□ 1.7
Nhej1Q3KNJ2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Nhej1Q3KNJ2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Nhej1Q3KNJ2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Nhej1Q3KNJ2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Nhej1Q3KNJ2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nhej1Q3KNJ2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Nhej1Q3KNJ2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Nhej1Q3KNJ2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Nhej1Q3KNJ2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Nhej1Q3KNJ2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Nhej1Q3KNJ2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Nhej1Q3KNJ2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.65■■□□□ 1.7
Nhej1Q3KNJ2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Nhej1Q3KNJ2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Nhej1Q3KNJ2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Nhej1Q3KNJ2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Nhej1Q3KNJ2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nhej1Q3KNJ2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Nhej1Q3KNJ2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Nhej1Q3KNJ2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nhej1Q3KNJ2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Nhej1Q3KNJ2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.62■■□□□ 1.69
Nhej1Q3KNJ2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Nhej1Q3KNJ2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Nhej1Q3KNJ2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.61■■□□□ 1.69
Nhej1Q3KNJ2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nhej1Q3KNJ2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nhej1Q3KNJ2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Nhej1Q3KNJ2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.58■■□□□ 1.69
Nhej1Q3KNJ2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nhej1Q3KNJ2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
Nhej1Q3KNJ2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nhej1Q3KNJ2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Nhej1Q3KNJ2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nhej1Q3KNJ2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nhej1Q3KNJ2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nhej1Q3KNJ2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nhej1Q3KNJ2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Nhej1Q3KNJ2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Nhej1Q3KNJ2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Nhej1Q3KNJ2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Nhej1Q3KNJ2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Nhej1Q3KNJ2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Nhej1Q3KNJ2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nhej1Q3KNJ2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nhej1Q3KNJ2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nhej1Q3KNJ2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nhej1Q3KNJ2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Nhej1Q3KNJ2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Nhej1Q3KNJ2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Nhej1Q3KNJ2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nhej1Q3KNJ2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms