Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.61■□□□□ 0.41
PrkdcP97313 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PrkdcP97313 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.61■□□□□ 0.41
PrkdcP97313 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.61■□□□□ 0.41
PrkdcP97313 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.61■□□□□ 0.41
PrkdcP97313 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PrkdcP97313 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PrkdcP97313 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PrkdcP97313 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PrkdcP97313 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.59■□□□□ 0.41
PrkdcP97313 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PrkdcP97313 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PrkdcP97313 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PrkdcP97313 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PrkdcP97313 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PrkdcP97313 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PrkdcP97313 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Gm12366-201ENSMUST00000121722 873 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.57■□□□□ 0.4
PrkdcP97313 Gm5812-201ENSMUST00000061073 957 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Gm5786-201ENSMUST00000085368 882 ntBASIC17.57■□□□□ 0.4
PrkdcP97313 Gm4799-201ENSMUST00000095396 657 ntBASIC17.56■□□□□ 0.4
PrkdcP97313 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrkdcP97313 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrkdcP97313 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PrkdcP97313 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.55■□□□□ 0.4
PrkdcP97313 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PrkdcP97313 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrkdcP97313 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PrkdcP97313 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.54■□□□□ 0.4
PrkdcP97313 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.53■□□□□ 0.4
PrkdcP97313 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PrkdcP97313 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PrkdcP97313 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PrkdcP97313 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.52■□□□□ 0.4
PrkdcP97313 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PrkdcP97313 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PrkdcP97313 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PrkdcP97313 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PrkdcP97313 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PrkdcP97313 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.48■□□□□ 0.39
PrkdcP97313 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PrkdcP97313 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.48■□□□□ 0.39
PrkdcP97313 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PrkdcP97313 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.47■□□□□ 0.39
PrkdcP97313 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PrkdcP97313 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.46■□□□□ 0.39
PrkdcP97313 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.46■□□□□ 0.39
PrkdcP97313 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.46■□□□□ 0.39
PrkdcP97313 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PrkdcP97313 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.45■□□□□ 0.38
PrkdcP97313 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PrkdcP97313 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.45■□□□□ 0.38
PrkdcP97313 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrkdcP97313 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrkdcP97313 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PrkdcP97313 Scarna2-201ENSMUST00000157560 414 ntBASIC17.42■□□□□ 0.38
PrkdcP97313 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PrkdcP97313 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.42■□□□□ 0.38
PrkdcP97313 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PrkdcP97313 Gm9806-201ENSMUST00000051080 552 ntBASIC17.41■□□□□ 0.38
PrkdcP97313 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.4■□□□□ 0.38
PrkdcP97313 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PrkdcP97313 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkdcP97313 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PrkdcP97313 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PrkdcP97313 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.39■□□□□ 0.37
PrkdcP97313 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PrkdcP97313 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.38■□□□□ 0.37
PrkdcP97313 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PrkdcP97313 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkdcP97313 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PrkdcP97313 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrkdcP97313 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkdcP97313 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.36■□□□□ 0.37
PrkdcP97313 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PrkdcP97313 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrkdcP97313 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PrkdcP97313 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.35■□□□□ 0.37
PrkdcP97313 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkdcP97313 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrkdcP97313 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PrkdcP97313 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrkdcP97313 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
PrkdcP97313 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms