Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf1P81269 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Atf1P81269 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf1P81269 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf1P81269 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf1P81269 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf1P81269 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atf1P81269 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf1P81269 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf1P81269 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atf1P81269 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf1P81269 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atf1P81269 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Atf1P81269 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Atf1P81269 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Atf1P81269 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf1P81269 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf1P81269 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf1P81269 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf1P81269 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf1P81269 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf1P81269 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atf1P81269 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf1P81269 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf1P81269 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf1P81269 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf1P81269 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf1P81269 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf1P81269 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf1P81269 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf1P81269 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.92■□□□□ 0.94
Atf1P81269 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf1P81269 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.9■□□□□ 0.94
Atf1P81269 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.89■□□□□ 0.93
Atf1P81269 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.88■□□□□ 0.93
Atf1P81269 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atf1P81269 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf1P81269 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atf1P81269 Zfp131-205ENSMUST00000223812 663 ntBASIC20.85■□□□□ 0.93
Atf1P81269 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.85■□□□□ 0.93
Atf1P81269 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf1P81269 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Atf1P81269 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf1P81269 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf1P81269 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf1P81269 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf1P81269 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atf1P81269 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.83■□□□□ 0.93
Atf1P81269 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atf1P81269 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atf1P81269 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Atf1P81269 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Atf1P81269 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atf1P81269 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Atf1P81269 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.8■□□□□ 0.92
Atf1P81269 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf1P81269 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Atf1P81269 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.79■□□□□ 0.92
Atf1P81269 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf1P81269 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atf1P81269 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atf1P81269 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atf1P81269 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf1P81269 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Atf1P81269 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.76■□□□□ 0.91
Atf1P81269 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf1P81269 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atf1P81269 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atf1P81269 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.75■□□□□ 0.91
Atf1P81269 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Atf1P81269 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atf1P81269 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Atf1P81269 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atf1P81269 Gm9397-201ENSMUST00000200125 605 ntBASIC20.74■□□□□ 0.91
Atf1P81269 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf1P81269 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atf1P81269 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf1P81269 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atf1P81269 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.74■□□□□ 0.91
Atf1P81269 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.73■□□□□ 0.91
Atf1P81269 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.73■□□□□ 0.91
Atf1P81269 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.73■□□□□ 0.91
Atf1P81269 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atf1P81269 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.72■□□□□ 0.91
Atf1P81269 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atf1P81269 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atf1P81269 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Atf1P81269 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.71■□□□□ 0.91
Atf1P81269 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Atf1P81269 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atf1P81269 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.7■□□□□ 0.9
Atf1P81269 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.69■□□□□ 0.9
Atf1P81269 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf1P81269 Gm24970-201ENSMUST00000175582 82 ntBASIC20.69■□□□□ 0.9
Atf1P81269 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Atf1P81269 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atf1P81269 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atf1P81269 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Atf1P81269 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf1P81269 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms