Protein–RNA interactions for Protein: P63013

Prrx1, Paired mesoderm homeobox protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrx1P63013 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrx1P63013 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.93■□□□□ 0.78
Prrx1P63013 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.93■□□□□ 0.78
Prrx1P63013 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrx1P63013 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prrx1P63013 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prrx1P63013 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prrx1P63013 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prrx1P63013 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prrx1P63013 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Prrx1P63013 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prrx1P63013 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.91■□□□□ 0.78
Prrx1P63013 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prrx1P63013 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prrx1P63013 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.9■□□□□ 0.78
Prrx1P63013 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prrx1P63013 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.89■□□□□ 0.77
Prrx1P63013 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Prrx1P63013 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.89■□□□□ 0.77
Prrx1P63013 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.88■□□□□ 0.77
Prrx1P63013 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.88■□□□□ 0.77
Prrx1P63013 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prrx1P63013 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prrx1P63013 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prrx1P63013 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prrx1P63013 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prrx1P63013 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prrx1P63013 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.86■□□□□ 0.77
Prrx1P63013 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prrx1P63013 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prrx1P63013 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prrx1P63013 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prrx1P63013 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prrx1P63013 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrx1P63013 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prrx1P63013 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrx1P63013 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrx1P63013 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrx1P63013 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.83■□□□□ 0.76
Prrx1P63013 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrx1P63013 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Prrx1P63013 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.81■□□□□ 0.76
Prrx1P63013 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrx1P63013 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrx1P63013 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Prrx1P63013 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrx1P63013 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrx1P63013 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrx1P63013 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrx1P63013 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrx1P63013 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prrx1P63013 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prrx1P63013 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.78■□□□□ 0.76
Prrx1P63013 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prrx1P63013 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prrx1P63013 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prrx1P63013 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prrx1P63013 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prrx1P63013 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.76■□□□□ 0.75
Prrx1P63013 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prrx1P63013 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prrx1P63013 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prrx1P63013 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.75■□□□□ 0.75
Prrx1P63013 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prrx1P63013 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prrx1P63013 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prrx1P63013 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prrx1P63013 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prrx1P63013 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prrx1P63013 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prrx1P63013 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prrx1P63013 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prrx1P63013 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prrx1P63013 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prrx1P63013 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prrx1P63013 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prrx1P63013 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.71■□□□□ 0.75
Prrx1P63013 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prrx1P63013 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prrx1P63013 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Prrx1P63013 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prrx1P63013 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.7■□□□□ 0.74
Prrx1P63013 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prrx1P63013 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prrx1P63013 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prrx1P63013 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prrx1P63013 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prrx1P63013 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prrx1P63013 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prrx1P63013 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prrx1P63013 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prrx1P63013 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prrx1P63013 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Prrx1P63013 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prrx1P63013 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prrx1P63013 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prrx1P63013 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prrx1P63013 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prrx1P63013 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prrx1P63013 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms