Protein–RNA interactions for Protein: P62823

Rab3c, Ras-related protein Rab-3C, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3cP62823 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab3cP62823 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab3cP62823 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab3cP62823 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Rab3cP62823 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab3cP62823 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab3cP62823 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rab3cP62823 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Rab3cP62823 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab3cP62823 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rab3cP62823 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab3cP62823 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab3cP62823 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab3cP62823 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab3cP62823 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab3cP62823 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab3cP62823 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rab3cP62823 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab3cP62823 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Rab3cP62823 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rab3cP62823 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab3cP62823 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.43■□□□□ 0.86
Rab3cP62823 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Rab3cP62823 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.42■□□□□ 0.86
Rab3cP62823 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab3cP62823 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab3cP62823 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab3cP62823 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
Rab3cP62823 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rab3cP62823 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab3cP62823 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rab3cP62823 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rab3cP62823 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab3cP62823 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rab3cP62823 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab3cP62823 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab3cP62823 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab3cP62823 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab3cP62823 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rab3cP62823 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.36■□□□□ 0.85
Rab3cP62823 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab3cP62823 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rab3cP62823 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab3cP62823 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab3cP62823 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab3cP62823 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rab3cP62823 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab3cP62823 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rab3cP62823 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rab3cP62823 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rab3cP62823 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rab3cP62823 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rab3cP62823 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab3cP62823 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rab3cP62823 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rab3cP62823 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rab3cP62823 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rab3cP62823 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab3cP62823 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab3cP62823 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab3cP62823 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab3cP62823 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab3cP62823 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab3cP62823 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab3cP62823 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab3cP62823 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Rab3cP62823 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab3cP62823 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.27■□□□□ 0.83
Rab3cP62823 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab3cP62823 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab3cP62823 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab3cP62823 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab3cP62823 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab3cP62823 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab3cP62823 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab3cP62823 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab3cP62823 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab3cP62823 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.23■□□□□ 0.83
Rab3cP62823 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Rab3cP62823 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab3cP62823 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab3cP62823 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab3cP62823 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rab3cP62823 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab3cP62823 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.21■□□□□ 0.83
Rab3cP62823 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab3cP62823 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3cP62823 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3cP62823 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.2■□□□□ 0.82
Rab3cP62823 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3cP62823 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3cP62823 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3cP62823 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3cP62823 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3cP62823 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3cP62823 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3cP62823 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3cP62823 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3cP62823 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3cP62823 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms