Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sssca1P56873 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sssca1P56873 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sssca1P56873 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sssca1P56873 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sssca1P56873 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sssca1P56873 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sssca1P56873 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sssca1P56873 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sssca1P56873 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sssca1P56873 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sssca1P56873 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sssca1P56873 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sssca1P56873 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sssca1P56873 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sssca1P56873 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sssca1P56873 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sssca1P56873 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sssca1P56873 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sssca1P56873 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sssca1P56873 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sssca1P56873 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sssca1P56873 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.39■□□□□ 0.69
Sssca1P56873 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sssca1P56873 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Sssca1P56873 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sssca1P56873 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sssca1P56873 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sssca1P56873 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sssca1P56873 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sssca1P56873 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sssca1P56873 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Sssca1P56873 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sssca1P56873 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sssca1P56873 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Sssca1P56873 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sssca1P56873 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sssca1P56873 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sssca1P56873 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sssca1P56873 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sssca1P56873 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sssca1P56873 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sssca1P56873 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sssca1P56873 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Sssca1P56873 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sssca1P56873 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sssca1P56873 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sssca1P56873 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
Sssca1P56873 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sssca1P56873 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sssca1P56873 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sssca1P56873 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sssca1P56873 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sssca1P56873 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sssca1P56873 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sssca1P56873 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sssca1P56873 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sssca1P56873 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sssca1P56873 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sssca1P56873 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sssca1P56873 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sssca1P56873 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sssca1P56873 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sssca1P56873 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.27■□□□□ 0.68
Sssca1P56873 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sssca1P56873 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.26■□□□□ 0.67
Sssca1P56873 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sssca1P56873 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sssca1P56873 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sssca1P56873 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Sssca1P56873 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sssca1P56873 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sssca1P56873 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sssca1P56873 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sssca1P56873 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.25■□□□□ 0.67
Sssca1P56873 Gm16148-201ENSMUST00000119653 893 ntBASIC19.25■□□□□ 0.67
Sssca1P56873 Gm24804-201ENSMUST00000174982 85 ntBASIC19.25■□□□□ 0.67
Sssca1P56873 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sssca1P56873 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.25■□□□□ 0.67
Sssca1P56873 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sssca1P56873 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.24■□□□□ 0.67
Sssca1P56873 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sssca1P56873 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sssca1P56873 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sssca1P56873 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sssca1P56873 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sssca1P56873 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sssca1P56873 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sssca1P56873 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Sssca1P56873 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sssca1P56873 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sssca1P56873 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sssca1P56873 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sssca1P56873 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms