Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sox1P53783 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.81■■□□□ 1.72
Sox1P53783 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Sox1P53783 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sox1P53783 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Sox1P53783 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.8■■□□□ 1.72
Sox1P53783 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.79■■□□□ 1.72
Sox1P53783 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.79■■□□□ 1.72
Sox1P53783 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.78■■□□□ 1.72
Sox1P53783 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sox1P53783 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sox1P53783 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Sox1P53783 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sox1P53783 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Sox1P53783 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Sox1P53783 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sox1P53783 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Sox1P53783 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.73■■□□□ 1.71
Sox1P53783 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sox1P53783 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sox1P53783 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sox1P53783 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.71■■□□□ 1.71
Sox1P53783 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.71■■□□□ 1.71
Sox1P53783 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.7■■□□□ 1.71
Sox1P53783 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.7■■□□□ 1.7
Sox1P53783 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sox1P53783 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.69■■□□□ 1.7
Sox1P53783 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sox1P53783 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sox1P53783 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Sox1P53783 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.68■■□□□ 1.7
Sox1P53783 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sox1P53783 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sox1P53783 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
Sox1P53783 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sox1P53783 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.66■■□□□ 1.7
Sox1P53783 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.66■■□□□ 1.7
Sox1P53783 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sox1P53783 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.65■■□□□ 1.7
Sox1P53783 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sox1P53783 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sox1P53783 Scarna2-201ENSMUST00000157560 414 ntBASIC25.64■■□□□ 1.7
Sox1P53783 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sox1P53783 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sox1P53783 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sox1P53783 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sox1P53783 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sox1P53783 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sox1P53783 Gm4799-201ENSMUST00000095396 657 ntBASIC25.62■■□□□ 1.69
Sox1P53783 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.61■■□□□ 1.69
Sox1P53783 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sox1P53783 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Sox1P53783 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sox1P53783 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sox1P53783 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Sox1P53783 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Sox1P53783 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sox1P53783 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Sox1P53783 Gm11687-201ENSMUST00000118911 886 ntBASIC25.56■■□□□ 1.68
Sox1P53783 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sox1P53783 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Sox1P53783 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sox1P53783 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sox1P53783 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sox1P53783 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sox1P53783 Gm7332-201ENSMUST00000118351 454 ntBASIC25.53■■□□□ 1.68
Sox1P53783 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sox1P53783 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.52■■□□□ 1.68
Sox1P53783 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
Sox1P53783 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sox1P53783 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Sox1P53783 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.51■■□□□ 1.67
Sox1P53783 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.51■■□□□ 1.67
Sox1P53783 Gm9806-201ENSMUST00000051080 552 ntBASIC25.51■■□□□ 1.67
Sox1P53783 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sox1P53783 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sox1P53783 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sox1P53783 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sox1P53783 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Sox1P53783 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sox1P53783 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Sox1P53783 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Sox1P53783 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.47■■□□□ 1.67
Sox1P53783 Gm27502-201ENSMUST00000183495 199 ntBASIC25.46■■□□□ 1.67
Sox1P53783 Gm16437-201ENSMUST00000025669 507 ntBASIC25.46■■□□□ 1.67
Sox1P53783 Gm5812-201ENSMUST00000061073 957 ntBASIC25.46■■□□□ 1.67
Sox1P53783 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.46■■□□□ 1.67
Sox1P53783 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sox1P53783 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.44■■□□□ 1.66
Sox1P53783 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sox1P53783 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sox1P53783 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sox1P53783 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.42■■□□□ 1.66
Sox1P53783 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Sox1P53783 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Sox1P53783 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sox1P53783 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sox1P53783 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sox1P53783 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Sox1P53783 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms