Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h1dP43277 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Hist1h1dP43277 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h1dP43277 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Hist1h1dP43277 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.51■□□□□ 0.87
Hist1h1dP43277 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.51■□□□□ 0.87
Hist1h1dP43277 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h1dP43277 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h1dP43277 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hist1h1dP43277 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h1dP43277 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h1dP43277 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h1dP43277 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h1dP43277 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h1dP43277 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h1dP43277 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h1dP43277 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h1dP43277 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h1dP43277 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h1dP43277 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Hist1h1dP43277 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h1dP43277 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hist1h1dP43277 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h1dP43277 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h1dP43277 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hist1h1dP43277 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h1dP43277 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h1dP43277 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hist1h1dP43277 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h1dP43277 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hist1h1dP43277 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.45■□□□□ 0.86
Hist1h1dP43277 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hist1h1dP43277 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h1dP43277 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hist1h1dP43277 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.43■□□□□ 0.86
Hist1h1dP43277 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h1dP43277 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h1dP43277 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hist1h1dP43277 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.41■□□□□ 0.86
Hist1h1dP43277 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hist1h1dP43277 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h1dP43277 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hist1h1dP43277 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hist1h1dP43277 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h1dP43277 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hist1h1dP43277 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.86
Hist1h1dP43277 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Hist1h1dP43277 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Hist1h1dP43277 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hist1h1dP43277 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h1dP43277 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.39■□□□□ 0.85
Hist1h1dP43277 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hist1h1dP43277 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h1dP43277 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h1dP43277 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h1dP43277 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hist1h1dP43277 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hist1h1dP43277 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h1dP43277 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h1dP43277 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h1dP43277 Gm24804-201ENSMUST00000174982 85 ntBASIC20.36■□□□□ 0.85
Hist1h1dP43277 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h1dP43277 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hist1h1dP43277 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hist1h1dP43277 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Hist1h1dP43277 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.34■□□□□ 0.85
Hist1h1dP43277 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hist1h1dP43277 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.34■□□□□ 0.85
Hist1h1dP43277 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h1dP43277 Gm16148-201ENSMUST00000119653 893 ntBASIC20.33■□□□□ 0.85
Hist1h1dP43277 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hist1h1dP43277 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h1dP43277 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h1dP43277 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hist1h1dP43277 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hist1h1dP43277 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h1dP43277 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h1dP43277 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hist1h1dP43277 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.29■□□□□ 0.84
Hist1h1dP43277 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h1dP43277 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hist1h1dP43277 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hist1h1dP43277 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h1dP43277 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h1dP43277 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h1dP43277 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h1dP43277 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hist1h1dP43277 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h1dP43277 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h1dP43277 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Hist1h1dP43277 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h1dP43277 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h1dP43277 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hist1h1dP43277 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms