Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Foxa2P35583 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxa2P35583 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Foxa2P35583 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.47■□□□□ 0.87
Foxa2P35583 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Foxa2P35583 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Foxa2P35583 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Foxa2P35583 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Foxa2P35583 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Foxa2P35583 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxa2P35583 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Foxa2P35583 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxa2P35583 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxa2P35583 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxa2P35583 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxa2P35583 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxa2P35583 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Foxa2P35583 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxa2P35583 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxa2P35583 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxa2P35583 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxa2P35583 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.41■□□□□ 0.86
Foxa2P35583 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Foxa2P35583 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxa2P35583 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxa2P35583 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxa2P35583 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Foxa2P35583 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Foxa2P35583 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Foxa2P35583 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Foxa2P35583 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Foxa2P35583 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.35■□□□□ 0.85
Foxa2P35583 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
Foxa2P35583 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Foxa2P35583 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.33■□□□□ 0.85
Foxa2P35583 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Foxa2P35583 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Foxa2P35583 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.32■□□□□ 0.84
Foxa2P35583 Zfp131-205ENSMUST00000223812 663 ntBASIC20.32■□□□□ 0.84
Foxa2P35583 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxa2P35583 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Foxa2P35583 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxa2P35583 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Foxa2P35583 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Foxa2P35583 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa2P35583 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.29■□□□□ 0.84
Foxa2P35583 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxa2P35583 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxa2P35583 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxa2P35583 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.28■□□□□ 0.84
Foxa2P35583 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxa2P35583 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Foxa2P35583 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxa2P35583 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Foxa2P35583 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa2P35583 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Foxa2P35583 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa2P35583 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Foxa2P35583 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa2P35583 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa2P35583 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Foxa2P35583 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.23■□□□□ 0.83
Foxa2P35583 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Foxa2P35583 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxa2P35583 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.21■□□□□ 0.83
Foxa2P35583 Gm9397-201ENSMUST00000200125 605 ntBASIC20.21■□□□□ 0.83
Foxa2P35583 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa2P35583 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.2■□□□□ 0.82
Foxa2P35583 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.2■□□□□ 0.82
Foxa2P35583 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxa2P35583 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.2■□□□□ 0.82
Foxa2P35583 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa2P35583 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
Foxa2P35583 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa2P35583 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa2P35583 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa2P35583 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.18■□□□□ 0.82
Foxa2P35583 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Foxa2P35583 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa2P35583 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa2P35583 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.17■□□□□ 0.82
Foxa2P35583 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa2P35583 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa2P35583 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Foxa2P35583 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa2P35583 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Foxa2P35583 Gm24970-201ENSMUST00000175582 82 ntBASIC20.15■□□□□ 0.82
Foxa2P35583 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.15■□□□□ 0.82
Foxa2P35583 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxa2P35583 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.14■□□□□ 0.82
Foxa2P35583 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa2P35583 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxa2P35583 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxa2P35583 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms