Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl6P27784 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccl6P27784 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.81■□□□□ 0.6
Ccl6P27784 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccl6P27784 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl6P27784 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl6P27784 Gm9397-201ENSMUST00000200125 605 ntBASIC18.79■□□□□ 0.6
Ccl6P27784 Gm45855-201ENSMUST00000212546 880 ntBASIC18.79■□□□□ 0.6
Ccl6P27784 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl6P27784 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl6P27784 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.78■□□□□ 0.6
Ccl6P27784 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl6P27784 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl6P27784 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccl6P27784 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl6P27784 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ccl6P27784 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl6P27784 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccl6P27784 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl6P27784 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl6P27784 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl6P27784 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
Ccl6P27784 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.74■□□□□ 0.59
Ccl6P27784 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccl6P27784 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccl6P27784 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl6P27784 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccl6P27784 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccl6P27784 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl6P27784 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl6P27784 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl6P27784 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl6P27784 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl6P27784 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl6P27784 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl6P27784 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl6P27784 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ccl6P27784 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl6P27784 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl6P27784 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl6P27784 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl6P27784 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl6P27784 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl6P27784 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccl6P27784 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl6P27784 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl6P27784 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccl6P27784 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl6P27784 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.67■□□□□ 0.58
Ccl6P27784 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl6P27784 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.67■□□□□ 0.58
Ccl6P27784 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl6P27784 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl6P27784 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl6P27784 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccl6P27784 Gm24970-201ENSMUST00000175582 82 ntBASIC18.66■□□□□ 0.58
Ccl6P27784 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl6P27784 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccl6P27784 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ccl6P27784 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ccl6P27784 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccl6P27784 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccl6P27784 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl6P27784 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Ccl6P27784 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.63■□□□□ 0.57
Ccl6P27784 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl6P27784 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccl6P27784 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl6P27784 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccl6P27784 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccl6P27784 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccl6P27784 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl6P27784 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl6P27784 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl6P27784 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl6P27784 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl6P27784 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl6P27784 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccl6P27784 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl6P27784 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.59■□□□□ 0.57
Ccl6P27784 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccl6P27784 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl6P27784 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl6P27784 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl6P27784 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccl6P27784 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl6P27784 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccl6P27784 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.56■□□□□ 0.56
Ccl6P27784 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccl6P27784 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccl6P27784 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl6P27784 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl6P27784 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl6P27784 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccl6P27784 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl6P27784 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccl6P27784 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl6P27784 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl6P27784 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl6P27784 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms