Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DhfrP00375 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DhfrP00375 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
DhfrP00375 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DhfrP00375 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DhfrP00375 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DhfrP00375 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
DhfrP00375 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.49■■□□□ 1.03
DhfrP00375 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DhfrP00375 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
DhfrP00375 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
DhfrP00375 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.49■■□□□ 1.03
DhfrP00375 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DhfrP00375 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.49■■□□□ 1.03
DhfrP00375 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DhfrP00375 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DhfrP00375 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DhfrP00375 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DhfrP00375 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DhfrP00375 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DhfrP00375 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
DhfrP00375 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DhfrP00375 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.47■■□□□ 1.03
DhfrP00375 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
DhfrP00375 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DhfrP00375 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DhfrP00375 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DhfrP00375 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DhfrP00375 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DhfrP00375 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DhfrP00375 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
DhfrP00375 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DhfrP00375 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DhfrP00375 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DhfrP00375 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DhfrP00375 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DhfrP00375 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DhfrP00375 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DhfrP00375 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DhfrP00375 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DhfrP00375 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
DhfrP00375 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
DhfrP00375 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.39■■□□□ 1.01
DhfrP00375 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.39■■□□□ 1.01
DhfrP00375 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DhfrP00375 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
DhfrP00375 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.38■■□□□ 1.01
DhfrP00375 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DhfrP00375 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DhfrP00375 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DhfrP00375 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DhfrP00375 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DhfrP00375 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.36■■□□□ 1.01
DhfrP00375 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.36■■□□□ 1.01
DhfrP00375 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
DhfrP00375 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DhfrP00375 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DhfrP00375 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.35■■□□□ 1.01
DhfrP00375 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
DhfrP00375 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DhfrP00375 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.34■■□□□ 1.01
DhfrP00375 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DhfrP00375 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DhfrP00375 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DhfrP00375 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DhfrP00375 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DhfrP00375 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DhfrP00375 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.32■■□□□ 1
DhfrP00375 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
DhfrP00375 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
DhfrP00375 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.31■■□□□ 1
DhfrP00375 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DhfrP00375 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.31■■□□□ 1
DhfrP00375 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
DhfrP00375 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DhfrP00375 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DhfrP00375 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.3■■□□□ 1
DhfrP00375 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DhfrP00375 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
DhfrP00375 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DhfrP00375 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DhfrP00375 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DhfrP00375 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
DhfrP00375 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
DhfrP00375 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
DhfrP00375 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DhfrP00375 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
DhfrP00375 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DhfrP00375 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
DhfrP00375 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DhfrP00375 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DhfrP00375 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DhfrP00375 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DhfrP00375 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms