Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tgfbr3O88393 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.6■■□□□ 1.37
Tgfbr3O88393 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.58■■□□□ 1.37
Tgfbr3O88393 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tgfbr3O88393 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Tgfbr3O88393 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tgfbr3O88393 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tgfbr3O88393 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.55■■□□□ 1.36
Tgfbr3O88393 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tgfbr3O88393 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
Tgfbr3O88393 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.53■■□□□ 1.36
Tgfbr3O88393 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Tgfbr3O88393 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tgfbr3O88393 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.52■■□□□ 1.36
Tgfbr3O88393 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tgfbr3O88393 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tgfbr3O88393 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tgfbr3O88393 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Tgfbr3O88393 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Tgfbr3O88393 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tgfbr3O88393 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tgfbr3O88393 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.48■■□□□ 1.35
Tgfbr3O88393 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tgfbr3O88393 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tgfbr3O88393 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tgfbr3O88393 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tgfbr3O88393 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tgfbr3O88393 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tgfbr3O88393 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.45■■□□□ 1.34
Tgfbr3O88393 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tgfbr3O88393 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.44■■□□□ 1.34
Tgfbr3O88393 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Tgfbr3O88393 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tgfbr3O88393 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Tgfbr3O88393 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Tgfbr3O88393 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Tgfbr3O88393 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tgfbr3O88393 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.41■■□□□ 1.34
Tgfbr3O88393 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.41■■□□□ 1.34
Tgfbr3O88393 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tgfbr3O88393 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.4■■□□□ 1.34
Tgfbr3O88393 Gm11175-201ENSMUST00000116172 543 ntBASIC23.4■■□□□ 1.34
Tgfbr3O88393 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.4■■□□□ 1.34
Tgfbr3O88393 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Tgfbr3O88393 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Tgfbr3O88393 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
Tgfbr3O88393 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Tgfbr3O88393 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Tgfbr3O88393 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tgfbr3O88393 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Tgfbr3O88393 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tgfbr3O88393 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tgfbr3O88393 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tgfbr3O88393 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Tgfbr3O88393 Mir6538-201ENSMUST00000183713 110 ntBASIC23.35■■□□□ 1.33
Tgfbr3O88393 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Tgfbr3O88393 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tgfbr3O88393 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Tgfbr3O88393 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Tgfbr3O88393 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Tgfbr3O88393 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Tgfbr3O88393 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.33■■□□□ 1.33
Tgfbr3O88393 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.32■■□□□ 1.32
Tgfbr3O88393 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Tgfbr3O88393 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tgfbr3O88393 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tgfbr3O88393 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tgfbr3O88393 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.32■■□□□ 1.32
Tgfbr3O88393 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tgfbr3O88393 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tgfbr3O88393 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tgfbr3O88393 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tgfbr3O88393 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tgfbr3O88393 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tgfbr3O88393 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.28■■□□□ 1.32
Tgfbr3O88393 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tgfbr3O88393 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Tgfbr3O88393 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tgfbr3O88393 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tgfbr3O88393 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tgfbr3O88393 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tgfbr3O88393 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tgfbr3O88393 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tgfbr3O88393 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tgfbr3O88393 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tgfbr3O88393 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.22■■□□□ 1.31
Tgfbr3O88393 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.22■■□□□ 1.31
Tgfbr3O88393 Gm30023-201ENSMUST00000197970 889 ntBASIC23.22■■□□□ 1.31
Tgfbr3O88393 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tgfbr3O88393 Gm6311-201ENSMUST00000073790 878 ntBASIC23.2■■□□□ 1.3
Tgfbr3O88393 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.19■■□□□ 1.3
Tgfbr3O88393 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tgfbr3O88393 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tgfbr3O88393 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tgfbr3O88393 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Tgfbr3O88393 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Tgfbr3O88393 Cap2-205ENSMUST00000225824 1634 ntBASIC23.17■■□□□ 1.3
Tgfbr3O88393 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Tgfbr3O88393 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Tgfbr3O88393 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 251.2 ms