Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pdlim3O70209 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim3O70209 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim3O70209 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim3O70209 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pdlim3O70209 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim3O70209 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Pdlim3O70209 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim3O70209 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim3O70209 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim3O70209 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim3O70209 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.91■■□□□ 1.1
Pdlim3O70209 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pdlim3O70209 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.91■■□□□ 1.1
Pdlim3O70209 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Pdlim3O70209 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim3O70209 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim3O70209 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim3O70209 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdlim3O70209 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pdlim3O70209 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pdlim3O70209 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pdlim3O70209 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Pdlim3O70209 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim3O70209 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim3O70209 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdlim3O70209 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pdlim3O70209 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pdlim3O70209 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pdlim3O70209 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pdlim3O70209 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.86■■□□□ 1.09
Pdlim3O70209 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pdlim3O70209 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pdlim3O70209 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pdlim3O70209 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pdlim3O70209 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
Pdlim3O70209 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pdlim3O70209 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Pdlim3O70209 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pdlim3O70209 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pdlim3O70209 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim3O70209 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdlim3O70209 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Pdlim3O70209 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.83■■□□□ 1.08
Pdlim3O70209 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim3O70209 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdlim3O70209 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.82■■□□□ 1.08
Pdlim3O70209 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pdlim3O70209 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim3O70209 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pdlim3O70209 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim3O70209 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim3O70209 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdlim3O70209 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.79■■□□□ 1.08
Pdlim3O70209 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim3O70209 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim3O70209 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdlim3O70209 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdlim3O70209 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pdlim3O70209 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.77■■□□□ 1.08
Pdlim3O70209 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim3O70209 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim3O70209 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pdlim3O70209 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim3O70209 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim3O70209 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim3O70209 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim3O70209 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pdlim3O70209 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim3O70209 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim3O70209 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim3O70209 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim3O70209 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim3O70209 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.74■■□□□ 1.07
Pdlim3O70209 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim3O70209 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim3O70209 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim3O70209 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim3O70209 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Pdlim3O70209 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim3O70209 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim3O70209 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim3O70209 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim3O70209 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pdlim3O70209 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.67■■□□□ 1.06
Pdlim3O70209 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim3O70209 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.67■■□□□ 1.06
Pdlim3O70209 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim3O70209 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim3O70209 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim3O70209 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim3O70209 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim3O70209 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim3O70209 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pdlim3O70209 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.63■■□□□ 1.05
Pdlim3O70209 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim3O70209 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim3O70209 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim3O70209 Gm16148-201ENSMUST00000119653 893 ntBASIC21.62■■□□□ 1.05
Pdlim3O70209 Gm24804-201ENSMUST00000174982 85 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms