Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC33.43■■■□□ 2.94
Cntnap1O54991 Gm5786-201ENSMUST00000085368 882 ntBASIC33.43■■■□□ 2.94
Cntnap1O54991 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC33.43■■■□□ 2.94
Cntnap1O54991 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC33.42■■■□□ 2.94
Cntnap1O54991 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cntnap1O54991 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC33.42■■■□□ 2.94
Cntnap1O54991 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
Cntnap1O54991 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Cntnap1O54991 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC33.41■■■□□ 2.94
Cntnap1O54991 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Cntnap1O54991 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC33.39■■■□□ 2.94
Cntnap1O54991 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Cntnap1O54991 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Cntnap1O54991 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Cntnap1O54991 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
Cntnap1O54991 Gm22567-201ENSMUST00000175542 342 ntBASIC33.37■■■□□ 2.93
Cntnap1O54991 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cntnap1O54991 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cntnap1O54991 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Cntnap1O54991 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Cntnap1O54991 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC33.34■■■□□ 2.93
Cntnap1O54991 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC33.33■■■□□ 2.93
Cntnap1O54991 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Cntnap1O54991 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Cntnap1O54991 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Cntnap1O54991 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Cntnap1O54991 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
Cntnap1O54991 Gm6345-201ENSMUST00000180378 1691 ntBASIC33.3■■■□□ 2.92
Cntnap1O54991 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Cntnap1O54991 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC33.29■■■□□ 2.92
Cntnap1O54991 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Cntnap1O54991 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cntnap1O54991 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Cntnap1O54991 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Cntnap1O54991 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cntnap1O54991 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cntnap1O54991 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC33.22■■■□□ 2.91
Cntnap1O54991 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cntnap1O54991 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC33.21■■■□□ 2.91
Cntnap1O54991 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC33.21■■■□□ 2.91
Cntnap1O54991 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Cntnap1O54991 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Cntnap1O54991 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Cntnap1O54991 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Cntnap1O54991 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Cntnap1O54991 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Cntnap1O54991 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Cntnap1O54991 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC33.17■■■□□ 2.9
Cntnap1O54991 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC33.17■■■□□ 2.9
Cntnap1O54991 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Cntnap1O54991 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Cntnap1O54991 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC33.14■■■□□ 2.9
Cntnap1O54991 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Cntnap1O54991 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Cntnap1O54991 Scarna2-201ENSMUST00000157560 414 ntBASIC33.13■■■□□ 2.89
Cntnap1O54991 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC33.13■■■□□ 2.89
Cntnap1O54991 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Cntnap1O54991 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Cntnap1O54991 Gm4799-201ENSMUST00000095396 657 ntBASIC33.11■■■□□ 2.89
Cntnap1O54991 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Cntnap1O54991 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Cntnap1O54991 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Cntnap1O54991 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Cntnap1O54991 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC33.08■■■□□ 2.89
Cntnap1O54991 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Cntnap1O54991 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC33.08■■■□□ 2.89
Cntnap1O54991 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC33.07■■■□□ 2.88
Cntnap1O54991 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Cntnap1O54991 Gm11687-201ENSMUST00000118911 886 ntBASIC33.06■■■□□ 2.88
Cntnap1O54991 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Cntnap1O54991 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cntnap1O54991 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cntnap1O54991 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Cntnap1O54991 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Cntnap1O54991 Gm9806-201ENSMUST00000051080 552 ntBASIC33.02■■■□□ 2.88
Cntnap1O54991 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Cntnap1O54991 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Cntnap1O54991 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Cntnap1O54991 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC33.01■■■□□ 2.88
Cntnap1O54991 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC33■■■□□ 2.87
Cntnap1O54991 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
Cntnap1O54991 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Cntnap1O54991 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC32.99■■■□□ 2.87
Cntnap1O54991 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.98■■■□□ 2.87
Cntnap1O54991 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Cntnap1O54991 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Cntnap1O54991 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
Cntnap1O54991 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cntnap1O54991 Gm7332-201ENSMUST00000118351 454 ntBASIC32.96■■■□□ 2.87
Cntnap1O54991 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cntnap1O54991 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cntnap1O54991 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC32.96■■■□□ 2.87
Cntnap1O54991 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Cntnap1O54991 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Cntnap1O54991 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC32.91■■■□□ 2.86
Cntnap1O54991 Gm5812-201ENSMUST00000061073 957 ntBASIC32.91■■■□□ 2.86
Cntnap1O54991 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Cntnap1O54991 Gm27502-201ENSMUST00000183495 199 ntBASIC32.87■■■□□ 2.85
Cntnap1O54991 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Cntnap1O54991 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms