Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufa1O35683 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufa1O35683 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufa1O35683 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufa1O35683 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufa1O35683 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ndufa1O35683 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufa1O35683 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa1O35683 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa1O35683 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa1O35683 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa1O35683 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa1O35683 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ndufa1O35683 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ndufa1O35683 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufa1O35683 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa1O35683 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa1O35683 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa1O35683 Gm8109-201ENSMUST00000194076 746 ntBASIC17.16■□□□□ 0.34
Ndufa1O35683 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa1O35683 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa1O35683 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ndufa1O35683 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa1O35683 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.15■□□□□ 0.34
Ndufa1O35683 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa1O35683 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa1O35683 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa1O35683 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa1O35683 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ndufa1O35683 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa1O35683 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa1O35683 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa1O35683 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa1O35683 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa1O35683 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa1O35683 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa1O35683 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa1O35683 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa1O35683 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ndufa1O35683 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa1O35683 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa1O35683 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa1O35683 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa1O35683 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa1O35683 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa1O35683 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufa1O35683 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufa1O35683 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufa1O35683 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufa1O35683 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufa1O35683 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufa1O35683 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufa1O35683 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufa1O35683 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa1O35683 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ndufa1O35683 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ndufa1O35683 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa1O35683 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa1O35683 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ndufa1O35683 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa1O35683 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.04■□□□□ 0.32
Ndufa1O35683 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufa1O35683 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufa1O35683 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufa1O35683 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufa1O35683 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.03■□□□□ 0.32
Ndufa1O35683 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.03■□□□□ 0.32
Ndufa1O35683 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ndufa1O35683 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufa1O35683 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufa1O35683 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ndufa1O35683 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndufa1O35683 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ndufa1O35683 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndufa1O35683 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.01■□□□□ 0.31
Ndufa1O35683 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.01■□□□□ 0.31
Ndufa1O35683 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ndufa1O35683 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndufa1O35683 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndufa1O35683 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ndufa1O35683 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndufa1O35683 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ndufa1O35683 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa1O35683 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa1O35683 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ndufa1O35683 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.99■□□□□ 0.31
Ndufa1O35683 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ndufa1O35683 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.98■□□□□ 0.31
Ndufa1O35683 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndufa1O35683 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndufa1O35683 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndufa1O35683 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ndufa1O35683 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndufa1O35683 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms