Protein–RNA interactions for Protein: F6R5P4

Ccl17, C-C motif chemokine, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl17F6R5P4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl17F6R5P4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl17F6R5P4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccl17F6R5P4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl17F6R5P4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl17F6R5P4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl17F6R5P4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl17F6R5P4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl17F6R5P4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl17F6R5P4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccl17F6R5P4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl17F6R5P4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl17F6R5P4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl17F6R5P4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccl17F6R5P4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccl17F6R5P4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccl17F6R5P4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccl17F6R5P4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccl17F6R5P4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccl17F6R5P4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccl17F6R5P4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl17F6R5P4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl17F6R5P4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccl17F6R5P4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccl17F6R5P4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccl17F6R5P4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.86■□□□□ 0.45
Ccl17F6R5P4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccl17F6R5P4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccl17F6R5P4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccl17F6R5P4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Ccl17F6R5P4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Ccl17F6R5P4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccl17F6R5P4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccl17F6R5P4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccl17F6R5P4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl17F6R5P4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccl17F6R5P4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Ccl17F6R5P4 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.82■□□□□ 0.44
Ccl17F6R5P4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl17F6R5P4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Ccl17F6R5P4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl17F6R5P4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccl17F6R5P4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl17F6R5P4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl17F6R5P4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl17F6R5P4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl17F6R5P4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl17F6R5P4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl17F6R5P4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl17F6R5P4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccl17F6R5P4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl17F6R5P4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl17F6R5P4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccl17F6R5P4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccl17F6R5P4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccl17F6R5P4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl17F6R5P4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl17F6R5P4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl17F6R5P4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Ccl17F6R5P4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl17F6R5P4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl17F6R5P4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl17F6R5P4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccl17F6R5P4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl17F6R5P4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl17F6R5P4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl17F6R5P4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl17F6R5P4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl17F6R5P4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl17F6R5P4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccl17F6R5P4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl17F6R5P4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl17F6R5P4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl17F6R5P4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl17F6R5P4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccl17F6R5P4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl17F6R5P4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccl17F6R5P4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Ccl17F6R5P4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl17F6R5P4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl17F6R5P4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl17F6R5P4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl17F6R5P4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl17F6R5P4 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.67■□□□□ 0.42
Ccl17F6R5P4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl17F6R5P4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms