Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ccdc71lE9Q4T4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc71lE9Q4T4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc71lE9Q4T4 Amer2-203ENSMUST00000225247 2662 ntBASIC18.93■□□□□ 0.62
Ccdc71lE9Q4T4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc71lE9Q4T4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc71lE9Q4T4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc71lE9Q4T4 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.92■□□□□ 0.62
Ccdc71lE9Q4T4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.91■□□□□ 0.62
Ccdc71lE9Q4T4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc71lE9Q4T4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc71lE9Q4T4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc71lE9Q4T4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc71lE9Q4T4 Peli2-204ENSMUST00000226513 1320 ntBASIC18.89■□□□□ 0.61
Ccdc71lE9Q4T4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc71lE9Q4T4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc71lE9Q4T4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc71lE9Q4T4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc71lE9Q4T4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc71lE9Q4T4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc71lE9Q4T4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc71lE9Q4T4 Gm26115-201ENSMUST00000175605 87 ntBASIC18.85■□□□□ 0.61
Ccdc71lE9Q4T4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc71lE9Q4T4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71lE9Q4T4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71lE9Q4T4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc71lE9Q4T4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71lE9Q4T4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71lE9Q4T4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71lE9Q4T4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71lE9Q4T4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc71lE9Q4T4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71lE9Q4T4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71lE9Q4T4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71lE9Q4T4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc71lE9Q4T4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71lE9Q4T4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71lE9Q4T4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71lE9Q4T4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc71lE9Q4T4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71lE9Q4T4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc71lE9Q4T4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc71lE9Q4T4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71lE9Q4T4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc71lE9Q4T4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc71lE9Q4T4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc71lE9Q4T4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.79■□□□□ 0.6
Ccdc71lE9Q4T4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71lE9Q4T4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71lE9Q4T4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71lE9Q4T4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc71lE9Q4T4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc71lE9Q4T4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc71lE9Q4T4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc71lE9Q4T4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc71lE9Q4T4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc71lE9Q4T4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc71lE9Q4T4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.76■□□□□ 0.59
Ccdc71lE9Q4T4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc71lE9Q4T4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc71lE9Q4T4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc71lE9Q4T4 Gm8109-201ENSMUST00000194076 746 ntBASIC18.75■□□□□ 0.59
Ccdc71lE9Q4T4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc71lE9Q4T4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc71lE9Q4T4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc71lE9Q4T4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc71lE9Q4T4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc71lE9Q4T4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc71lE9Q4T4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc71lE9Q4T4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc71lE9Q4T4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc71lE9Q4T4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc71lE9Q4T4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc71lE9Q4T4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc71lE9Q4T4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc71lE9Q4T4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Ccdc71lE9Q4T4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.7■□□□□ 0.58
Ccdc71lE9Q4T4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc71lE9Q4T4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc71lE9Q4T4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.7■□□□□ 0.58
Ccdc71lE9Q4T4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc71lE9Q4T4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc71lE9Q4T4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc71lE9Q4T4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc71lE9Q4T4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc71lE9Q4T4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc71lE9Q4T4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc71lE9Q4T4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc71lE9Q4T4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc71lE9Q4T4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccdc71lE9Q4T4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc71lE9Q4T4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc71lE9Q4T4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc71lE9Q4T4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms