Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12d-1A0N8R0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12d-1A0N8R0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.53■□□□□ 0.72
Trav12d-1A0N8R0 Gm8109-201ENSMUST00000194076 746 ntBASIC19.53■□□□□ 0.72
Trav12d-1A0N8R0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12d-1A0N8R0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav12d-1A0N8R0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trav12d-1A0N8R0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav12d-1A0N8R0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.51■□□□□ 0.71
Trav12d-1A0N8R0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav12d-1A0N8R0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-1A0N8R0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-1A0N8R0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-1A0N8R0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-1A0N8R0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-1A0N8R0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-1A0N8R0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-1A0N8R0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12d-1A0N8R0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12d-1A0N8R0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12d-1A0N8R0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav12d-1A0N8R0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav12d-1A0N8R0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trav12d-1A0N8R0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12d-1A0N8R0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12d-1A0N8R0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12d-1A0N8R0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Trav12d-1A0N8R0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12d-1A0N8R0 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.46■□□□□ 0.71
Trav12d-1A0N8R0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12d-1A0N8R0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12d-1A0N8R0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.46■□□□□ 0.71
Trav12d-1A0N8R0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trav12d-1A0N8R0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.44■□□□□ 0.7
Trav12d-1A0N8R0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12d-1A0N8R0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12d-1A0N8R0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12d-1A0N8R0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trav12d-1A0N8R0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav12d-1A0N8R0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav12d-1A0N8R0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav12d-1A0N8R0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav12d-1A0N8R0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav12d-1A0N8R0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12d-1A0N8R0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12d-1A0N8R0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12d-1A0N8R0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12d-1A0N8R0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trav12d-1A0N8R0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Trav12d-1A0N8R0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav12d-1A0N8R0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav12d-1A0N8R0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav12d-1A0N8R0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.39■□□□□ 0.69
Trav12d-1A0N8R0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav12d-1A0N8R0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12d-1A0N8R0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12d-1A0N8R0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12d-1A0N8R0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12d-1A0N8R0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12d-1A0N8R0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav12d-1A0N8R0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav12d-1A0N8R0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12d-1A0N8R0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12d-1A0N8R0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12d-1A0N8R0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12d-1A0N8R0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12d-1A0N8R0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12d-1A0N8R0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav12d-1A0N8R0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Trav12d-1A0N8R0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav12d-1A0N8R0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav12d-1A0N8R0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12d-1A0N8R0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12d-1A0N8R0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12d-1A0N8R0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12d-1A0N8R0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav12d-1A0N8R0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trav12d-1A0N8R0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav12d-1A0N8R0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.27■□□□□ 0.68
Trav12d-1A0N8R0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav12d-1A0N8R0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav12d-1A0N8R0 Gm16148-201ENSMUST00000119653 893 ntBASIC19.26■□□□□ 0.67
Trav12d-1A0N8R0 Gm24804-201ENSMUST00000174982 85 ntBASIC19.26■□□□□ 0.67
Trav12d-1A0N8R0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav12d-1A0N8R0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12d-1A0N8R0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12d-1A0N8R0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12d-1A0N8R0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav12d-1A0N8R0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav12d-1A0N8R0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav12d-1A0N8R0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12d-1A0N8R0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12d-1A0N8R0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12d-1A0N8R0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms