Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.21■□□□□ 0.83
Lnp1A0A1B0GSK3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Lnp1A0A1B0GSK3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.21■□□□□ 0.83
Lnp1A0A1B0GSK3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lnp1A0A1B0GSK3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lnp1A0A1B0GSK3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lnp1A0A1B0GSK3 Gm45855-201ENSMUST00000212546 880 ntBASIC20.2■□□□□ 0.82
Lnp1A0A1B0GSK3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lnp1A0A1B0GSK3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lnp1A0A1B0GSK3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lnp1A0A1B0GSK3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lnp1A0A1B0GSK3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lnp1A0A1B0GSK3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lnp1A0A1B0GSK3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lnp1A0A1B0GSK3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lnp1A0A1B0GSK3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lnp1A0A1B0GSK3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lnp1A0A1B0GSK3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
Lnp1A0A1B0GSK3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lnp1A0A1B0GSK3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lnp1A0A1B0GSK3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.16■□□□□ 0.82
Lnp1A0A1B0GSK3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.16■□□□□ 0.82
Lnp1A0A1B0GSK3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lnp1A0A1B0GSK3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lnp1A0A1B0GSK3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lnp1A0A1B0GSK3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lnp1A0A1B0GSK3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lnp1A0A1B0GSK3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.13■□□□□ 0.81
Lnp1A0A1B0GSK3 Gm24970-201ENSMUST00000175582 82 ntBASIC20.13■□□□□ 0.81
Lnp1A0A1B0GSK3 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.13■□□□□ 0.81
Lnp1A0A1B0GSK3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lnp1A0A1B0GSK3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lnp1A0A1B0GSK3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lnp1A0A1B0GSK3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lnp1A0A1B0GSK3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lnp1A0A1B0GSK3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lnp1A0A1B0GSK3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lnp1A0A1B0GSK3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Lnp1A0A1B0GSK3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Lnp1A0A1B0GSK3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.1■□□□□ 0.81
Lnp1A0A1B0GSK3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lnp1A0A1B0GSK3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lnp1A0A1B0GSK3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lnp1A0A1B0GSK3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lnp1A0A1B0GSK3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lnp1A0A1B0GSK3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lnp1A0A1B0GSK3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lnp1A0A1B0GSK3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lnp1A0A1B0GSK3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lnp1A0A1B0GSK3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Lnp1A0A1B0GSK3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.06■□□□□ 0.8
Lnp1A0A1B0GSK3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Lnp1A0A1B0GSK3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Lnp1A0A1B0GSK3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.06■□□□□ 0.8
Lnp1A0A1B0GSK3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Lnp1A0A1B0GSK3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lnp1A0A1B0GSK3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lnp1A0A1B0GSK3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lnp1A0A1B0GSK3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lnp1A0A1B0GSK3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lnp1A0A1B0GSK3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lnp1A0A1B0GSK3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lnp1A0A1B0GSK3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lnp1A0A1B0GSK3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lnp1A0A1B0GSK3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lnp1A0A1B0GSK3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.01■□□□□ 0.79
Lnp1A0A1B0GSK3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lnp1A0A1B0GSK3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lnp1A0A1B0GSK3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lnp1A0A1B0GSK3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.99■□□□□ 0.79
Lnp1A0A1B0GSK3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.99■□□□□ 0.79
Lnp1A0A1B0GSK3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lnp1A0A1B0GSK3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lnp1A0A1B0GSK3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lnp1A0A1B0GSK3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lnp1A0A1B0GSK3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lnp1A0A1B0GSK3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lnp1A0A1B0GSK3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lnp1A0A1B0GSK3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lnp1A0A1B0GSK3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lnp1A0A1B0GSK3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lnp1A0A1B0GSK3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lnp1A0A1B0GSK3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lnp1A0A1B0GSK3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.91■□□□□ 0.78
Lnp1A0A1B0GSK3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.91■□□□□ 0.78
Lnp1A0A1B0GSK3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lnp1A0A1B0GSK3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lnp1A0A1B0GSK3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lnp1A0A1B0GSK3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lnp1A0A1B0GSK3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lnp1A0A1B0GSK3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.88■□□□□ 0.77
Lnp1A0A1B0GSK3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lnp1A0A1B0GSK3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lnp1A0A1B0GSK3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lnp1A0A1B0GSK3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lnp1A0A1B0GSK3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
Lnp1A0A1B0GSK3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lnp1A0A1B0GSK3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lnp1A0A1B0GSK3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lnp1A0A1B0GSK3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms