Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv1-88A0A140T8N1 Peli2-204ENSMUST00000226513 1320 ntBASIC15.9■□□□□ 0.14
Igkv1-88A0A140T8N1 Gm26115-201ENSMUST00000175605 87 ntBASIC15.89■□□□□ 0.13
Igkv1-88A0A140T8N1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv1-88A0A140T8N1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv1-88A0A140T8N1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-88A0A140T8N1 Gm8109-201ENSMUST00000194076 746 ntBASIC15.88■□□□□ 0.13
Igkv1-88A0A140T8N1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-88A0A140T8N1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Igkv1-88A0A140T8N1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv1-88A0A140T8N1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv1-88A0A140T8N1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Igkv1-88A0A140T8N1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Igkv1-88A0A140T8N1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv1-88A0A140T8N1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv1-88A0A140T8N1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC15.85■□□□□ 0.13
Igkv1-88A0A140T8N1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-88A0A140T8N1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-88A0A140T8N1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv1-88A0A140T8N1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Igkv1-88A0A140T8N1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-88A0A140T8N1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-88A0A140T8N1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-88A0A140T8N1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Igkv1-88A0A140T8N1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-88A0A140T8N1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Igkv1-88A0A140T8N1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-88A0A140T8N1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-88A0A140T8N1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-88A0A140T8N1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-88A0A140T8N1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-88A0A140T8N1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-88A0A140T8N1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-88A0A140T8N1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.8■□□□□ 0.12
Igkv1-88A0A140T8N1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-88A0A140T8N1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-88A0A140T8N1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Igkv1-88A0A140T8N1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-88A0A140T8N1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Igkv1-88A0A140T8N1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Igkv1-88A0A140T8N1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv1-88A0A140T8N1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.78■□□□□ 0.12
Igkv1-88A0A140T8N1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.78■□□□□ 0.12
Igkv1-88A0A140T8N1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv1-88A0A140T8N1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv1-88A0A140T8N1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv1-88A0A140T8N1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Igkv1-88A0A140T8N1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv1-88A0A140T8N1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv1-88A0A140T8N1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-88A0A140T8N1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-88A0A140T8N1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-88A0A140T8N1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-88A0A140T8N1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Igkv1-88A0A140T8N1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv1-88A0A140T8N1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv1-88A0A140T8N1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Igkv1-88A0A140T8N1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Igkv1-88A0A140T8N1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv1-88A0A140T8N1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv1-88A0A140T8N1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv1-88A0A140T8N1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv1-88A0A140T8N1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.72■□□□□ 0.11
Igkv1-88A0A140T8N1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv1-88A0A140T8N1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv1-88A0A140T8N1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv1-88A0A140T8N1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Igkv1-88A0A140T8N1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv1-88A0A140T8N1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv1-88A0A140T8N1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.69■□□□□ 0.1
Igkv1-88A0A140T8N1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Igkv1-88A0A140T8N1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv1-88A0A140T8N1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv1-88A0A140T8N1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv1-88A0A140T8N1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Igkv1-88A0A140T8N1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv1-88A0A140T8N1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv1-88A0A140T8N1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.67■□□□□ 0.1
Igkv1-88A0A140T8N1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.67■□□□□ 0.1
Igkv1-88A0A140T8N1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Igkv1-88A0A140T8N1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Igkv1-88A0A140T8N1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv1-88A0A140T8N1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Igkv1-88A0A140T8N1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Igkv1-88A0A140T8N1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Igkv1-88A0A140T8N1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms