Protein–RNA interactions for Protein: A0A0N4SWI3

D6Ertd527e, DNA segment, Chr 6, ERATO Doi 527,-expressed, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
D6Ertd527eA0A0N4SWI3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.47□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.47□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.47□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC14.46□□□□□ -0.09
D6Ertd527eA0A0N4SWI3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.44□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.44□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.43□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Gm11175-201ENSMUST00000116172 543 ntBASIC14.42□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.4□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Gm2415-204ENSMUST00000190235 2004 ntBASIC14.4□□□□□ -0.1
D6Ertd527eA0A0N4SWI3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC14.39□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.34□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.34□□□□□ -0.11
D6Ertd527eA0A0N4SWI3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC14.33□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Gm6658-202ENSMUST00000209493 1885 ntBASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Cap2-205ENSMUST00000225824 1634 ntBASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Gm6311-201ENSMUST00000073790 878 ntBASIC14.31□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.29□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.29□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.28□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
D6Ertd527eA0A0N4SWI3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.26□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.25□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.24□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Particl-201ENSMUST00000205370 1560 ntBASIC14.24□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.22□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.21□□□□□ -0.13
D6Ertd527eA0A0N4SWI3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
D6Ertd527eA0A0N4SWI3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
D6Ertd527eA0A0N4SWI3 Gm6345-201ENSMUST00000180378 1691 ntBASIC14.2□□□□□ -0.14
D6Ertd527eA0A0N4SWI3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
D6Ertd527eA0A0N4SWI3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
D6Ertd527eA0A0N4SWI3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
D6Ertd527eA0A0N4SWI3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms