Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbv29A0A0G2LB96 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbv29A0A0G2LB96 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv29A0A0G2LB96 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv29A0A0G2LB96 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv29A0A0G2LB96 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv29A0A0G2LB96 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trbv29A0A0G2LB96 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv29A0A0G2LB96 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 Gm24804-201ENSMUST00000174982 85 ntBASIC20.06■□□□□ 0.8
Trbv29A0A0G2LB96 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.04■□□□□ 0.8
Trbv29A0A0G2LB96 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv29A0A0G2LB96 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv29A0A0G2LB96 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv29A0A0G2LB96 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv29A0A0G2LB96 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Gm16148-201ENSMUST00000119653 893 ntBASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv29A0A0G2LB96 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv29A0A0G2LB96 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv29A0A0G2LB96 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.9■□□□□ 0.78
Trbv29A0A0G2LB96 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trbv29A0A0G2LB96 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trbv29A0A0G2LB96 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trbv29A0A0G2LB96 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms