Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav13d-4A0A0G2JFX3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-4A0A0G2JFX3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-4A0A0G2JFX3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13d-4A0A0G2JFX3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13d-4A0A0G2JFX3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.52■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav13d-4A0A0G2JFX3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav13d-4A0A0G2JFX3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-4A0A0G2JFX3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Gm24804-201ENSMUST00000174982 85 ntBASIC16.42■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
Trav13d-4A0A0G2JFX3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Gm16148-201ENSMUST00000119653 893 ntBASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-4A0A0G2JFX3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-4A0A0G2JFX3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-4A0A0G2JFX3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13d-4A0A0G2JFX3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms