Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv4-50A0A0B4J1J0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.52■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Zfp131-205ENSMUST00000223812 663 ntBASIC20.5■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Igkv4-50A0A0B4J1J0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv4-50A0A0B4J1J0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv4-50A0A0B4J1J0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.45■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.44■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.44■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.42■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv4-50A0A0B4J1J0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Igkv4-50A0A0B4J1J0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.41■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv4-50A0A0B4J1J0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.4■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.4■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv4-50A0A0B4J1J0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.38■□□□□ 0.85
Igkv4-50A0A0B4J1J0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.37■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.37■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv4-50A0A0B4J1J0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.37■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.36■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv4-50A0A0B4J1J0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.33■□□□□ 0.85
Igkv4-50A0A0B4J1J0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.31■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.29■□□□□ 0.84
Igkv4-50A0A0B4J1J0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv4-50A0A0B4J1J0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv4-50A0A0B4J1J0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv4-50A0A0B4J1J0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.26■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.25■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Gm45855-201ENSMUST00000212546 880 ntBASIC20.25■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-50A0A0B4J1J0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.23■□□□□ 0.83
Igkv4-50A0A0B4J1J0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.23■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.23■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv4-50A0A0B4J1J0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv4-50A0A0B4J1J0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.18■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv4-50A0A0B4J1J0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Igkv4-50A0A0B4J1J0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv4-50A0A0B4J1J0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv4-50A0A0B4J1J0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms