Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-47A0A0A6YY41 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ighv1-47A0A0A6YY41 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ighv1-47A0A0A6YY41 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-47A0A0A6YY41 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.98■□□□□ 0.79
Ighv1-47A0A0A6YY41 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-47A0A0A6YY41 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ighv1-47A0A0A6YY41 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-47A0A0A6YY41 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-47A0A0A6YY41 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-47A0A0A6YY41 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-47A0A0A6YY41 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-47A0A0A6YY41 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-47A0A0A6YY41 Zfp131-205ENSMUST00000223812 663 ntBASIC19.94■□□□□ 0.78
Ighv1-47A0A0A6YY41 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-47A0A0A6YY41 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-47A0A0A6YY41 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-47A0A0A6YY41 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-47A0A0A6YY41 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-47A0A0A6YY41 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-47A0A0A6YY41 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-47A0A0A6YY41 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Ighv1-47A0A0A6YY41 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.92■□□□□ 0.78
Ighv1-47A0A0A6YY41 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-47A0A0A6YY41 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.92■□□□□ 0.78
Ighv1-47A0A0A6YY41 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-47A0A0A6YY41 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-47A0A0A6YY41 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-47A0A0A6YY41 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-47A0A0A6YY41 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ighv1-47A0A0A6YY41 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-47A0A0A6YY41 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.9■□□□□ 0.78
Ighv1-47A0A0A6YY41 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ighv1-47A0A0A6YY41 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-47A0A0A6YY41 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-47A0A0A6YY41 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-47A0A0A6YY41 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-47A0A0A6YY41 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.88■□□□□ 0.77
Ighv1-47A0A0A6YY41 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ighv1-47A0A0A6YY41 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-47A0A0A6YY41 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.86■□□□□ 0.77
Ighv1-47A0A0A6YY41 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-47A0A0A6YY41 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-47A0A0A6YY41 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-47A0A0A6YY41 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.85■□□□□ 0.77
Ighv1-47A0A0A6YY41 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-47A0A0A6YY41 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-47A0A0A6YY41 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-47A0A0A6YY41 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-47A0A0A6YY41 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.83■□□□□ 0.76
Ighv1-47A0A0A6YY41 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-47A0A0A6YY41 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Ighv1-47A0A0A6YY41 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ighv1-47A0A0A6YY41 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-47A0A0A6YY41 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-47A0A0A6YY41 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-47A0A0A6YY41 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-47A0A0A6YY41 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-47A0A0A6YY41 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-47A0A0A6YY41 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.78■□□□□ 0.76
Ighv1-47A0A0A6YY41 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.77■□□□□ 0.76
Ighv1-47A0A0A6YY41 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-47A0A0A6YY41 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-47A0A0A6YY41 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Ighv1-47A0A0A6YY41 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ighv1-47A0A0A6YY41 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.76■□□□□ 0.75
Ighv1-47A0A0A6YY41 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-47A0A0A6YY41 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-47A0A0A6YY41 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-47A0A0A6YY41 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-47A0A0A6YY41 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-47A0A0A6YY41 Gm9397-201ENSMUST00000200125 605 ntBASIC19.74■□□□□ 0.75
Ighv1-47A0A0A6YY41 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-47A0A0A6YY41 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-47A0A0A6YY41 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ighv1-47A0A0A6YY41 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-47A0A0A6YY41 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.71■□□□□ 0.75
Ighv1-47A0A0A6YY41 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.71■□□□□ 0.75
Ighv1-47A0A0A6YY41 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-47A0A0A6YY41 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-47A0A0A6YY41 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.7■□□□□ 0.74
Ighv1-47A0A0A6YY41 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-47A0A0A6YY41 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-47A0A0A6YY41 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 332.7 ms