Protein–RNA interactions for Protein: A0A087WPA9

Scgb2b18, ABPBG18, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b18A0A087WPA9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Scgb2b18A0A087WPA9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Scgb2b18A0A087WPA9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scgb2b18A0A087WPA9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Scgb2b18A0A087WPA9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Scgb2b18A0A087WPA9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Scgb2b18A0A087WPA9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Scgb2b18A0A087WPA9 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.71■■□□□ 1.87
Scgb2b18A0A087WPA9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Scgb2b18A0A087WPA9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
Scgb2b18A0A087WPA9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
Scgb2b18A0A087WPA9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Scgb2b18A0A087WPA9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Scgb2b18A0A087WPA9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Scgb2b18A0A087WPA9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scgb2b18A0A087WPA9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scgb2b18A0A087WPA9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scgb2b18A0A087WPA9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Scgb2b18A0A087WPA9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.67■■□□□ 1.86
Scgb2b18A0A087WPA9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scgb2b18A0A087WPA9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Scgb2b18A0A087WPA9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scgb2b18A0A087WPA9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.63■■□□□ 1.85
Scgb2b18A0A087WPA9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.63■■□□□ 1.85
Scgb2b18A0A087WPA9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scgb2b18A0A087WPA9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scgb2b18A0A087WPA9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Scgb2b18A0A087WPA9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Scgb2b18A0A087WPA9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Scgb2b18A0A087WPA9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.6■■□□□ 1.85
Scgb2b18A0A087WPA9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Scgb2b18A0A087WPA9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scgb2b18A0A087WPA9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scgb2b18A0A087WPA9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scgb2b18A0A087WPA9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
Scgb2b18A0A087WPA9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.56■■□□□ 1.84
Scgb2b18A0A087WPA9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Scgb2b18A0A087WPA9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Scgb2b18A0A087WPA9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Scgb2b18A0A087WPA9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scgb2b18A0A087WPA9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scgb2b18A0A087WPA9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Scgb2b18A0A087WPA9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Scgb2b18A0A087WPA9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.53■■□□□ 1.84
Scgb2b18A0A087WPA9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scgb2b18A0A087WPA9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
Scgb2b18A0A087WPA9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
Scgb2b18A0A087WPA9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scgb2b18A0A087WPA9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scgb2b18A0A087WPA9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scgb2b18A0A087WPA9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Scgb2b18A0A087WPA9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.49■■□□□ 1.83
Scgb2b18A0A087WPA9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scgb2b18A0A087WPA9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Scgb2b18A0A087WPA9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.49■■□□□ 1.83
Scgb2b18A0A087WPA9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scgb2b18A0A087WPA9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Scgb2b18A0A087WPA9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.46■■□□□ 1.83
Scgb2b18A0A087WPA9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Scgb2b18A0A087WPA9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scgb2b18A0A087WPA9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Scgb2b18A0A087WPA9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Scgb2b18A0A087WPA9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Scgb2b18A0A087WPA9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
Scgb2b18A0A087WPA9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scgb2b18A0A087WPA9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Scgb2b18A0A087WPA9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scgb2b18A0A087WPA9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.43■■□□□ 1.82
Scgb2b18A0A087WPA9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Scgb2b18A0A087WPA9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scgb2b18A0A087WPA9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Scgb2b18A0A087WPA9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Scgb2b18A0A087WPA9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scgb2b18A0A087WPA9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.41■■□□□ 1.82
Scgb2b18A0A087WPA9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.4■■□□□ 1.82
Scgb2b18A0A087WPA9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scgb2b18A0A087WPA9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scgb2b18A0A087WPA9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Scgb2b18A0A087WPA9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Scgb2b18A0A087WPA9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Scgb2b18A0A087WPA9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scgb2b18A0A087WPA9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scgb2b18A0A087WPA9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scgb2b18A0A087WPA9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Scgb2b18A0A087WPA9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scgb2b18A0A087WPA9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Scgb2b18A0A087WPA9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scgb2b18A0A087WPA9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scgb2b18A0A087WPA9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scgb2b18A0A087WPA9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scgb2b18A0A087WPA9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Scgb2b18A0A087WPA9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scgb2b18A0A087WPA9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scgb2b18A0A087WPA9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Scgb2b18A0A087WPA9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scgb2b18A0A087WPA9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scgb2b18A0A087WPA9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.31■■□□□ 1.8
Scgb2b18A0A087WPA9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Scgb2b18A0A087WPA9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Scgb2b18A0A087WPA9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms