Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trdv1A0A075B657 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv1A0A075B657 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trdv1A0A075B657 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trdv1A0A075B657 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv1A0A075B657 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv1A0A075B657 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv1A0A075B657 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv1A0A075B657 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv1A0A075B657 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv1A0A075B657 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trdv1A0A075B657 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdv1A0A075B657 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trdv1A0A075B657 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trdv1A0A075B657 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdv1A0A075B657 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.36■□□□□ 0.53
Trdv1A0A075B657 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdv1A0A075B657 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trdv1A0A075B657 Gm26115-201ENSMUST00000175605 87 ntBASIC18.36■□□□□ 0.53
Trdv1A0A075B657 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.36■□□□□ 0.53
Trdv1A0A075B657 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv1A0A075B657 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv1A0A075B657 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.35■□□□□ 0.53
Trdv1A0A075B657 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv1A0A075B657 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trdv1A0A075B657 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trdv1A0A075B657 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trdv1A0A075B657 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trdv1A0A075B657 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trdv1A0A075B657 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trdv1A0A075B657 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trdv1A0A075B657 Gm8109-201ENSMUST00000194076 746 ntBASIC18.33■□□□□ 0.52
Trdv1A0A075B657 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trdv1A0A075B657 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trdv1A0A075B657 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.31■□□□□ 0.52
Trdv1A0A075B657 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trdv1A0A075B657 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trdv1A0A075B657 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdv1A0A075B657 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.29■□□□□ 0.52
Trdv1A0A075B657 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdv1A0A075B657 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
Trdv1A0A075B657 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trdv1A0A075B657 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trdv1A0A075B657 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdv1A0A075B657 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdv1A0A075B657 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdv1A0A075B657 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdv1A0A075B657 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trdv1A0A075B657 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdv1A0A075B657 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdv1A0A075B657 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdv1A0A075B657 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trdv1A0A075B657 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdv1A0A075B657 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Trdv1A0A075B657 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trdv1A0A075B657 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdv1A0A075B657 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdv1A0A075B657 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trdv1A0A075B657 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdv1A0A075B657 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trdv1A0A075B657 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trdv1A0A075B657 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trdv1A0A075B657 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trdv1A0A075B657 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trdv1A0A075B657 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdv1A0A075B657 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.2■□□□□ 0.5
Trdv1A0A075B657 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trdv1A0A075B657 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.19■□□□□ 0.5
Trdv1A0A075B657 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdv1A0A075B657 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdv1A0A075B657 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trdv1A0A075B657 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdv1A0A075B657 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trdv1A0A075B657 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdv1A0A075B657 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdv1A0A075B657 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdv1A0A075B657 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trdv1A0A075B657 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trdv1A0A075B657 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.15■□□□□ 0.5
Trdv1A0A075B657 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trdv1A0A075B657 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdv1A0A075B657 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trdv1A0A075B657 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms