Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav15d-1-dv6d-1A0A075B624 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.51■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.49■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.47■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav15d-1-dv6d-1A0A075B624 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.44■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-1-dv6d-1A0A075B624 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.36■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.33■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav15d-1-dv6d-1A0A075B624 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.32■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Gm16148-201ENSMUST00000119653 893 ntBASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trav15d-1-dv6d-1A0A075B624 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav15d-1-dv6d-1A0A075B624 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav15d-1-dv6d-1A0A075B624 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms