Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ClcnkaQ9WUB7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Gm2399-201ENSMUST00000104944 225 ntBASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ClcnkaQ9WUB7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ClcnkaQ9WUB7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Gm29257-201ENSMUST00000186115 639 ntBASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Gm4968-201ENSMUST00000071458 858 ntBASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ClcnkaQ9WUB7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Tgds-204ENSMUST00000228543 1594 ntBASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ClcnkaQ9WUB7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.34■□□□□ 0.21
ClcnkaQ9WUB7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms