Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RpgrQ9R0X5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RpgrQ9R0X5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RpgrQ9R0X5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RpgrQ9R0X5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RpgrQ9R0X5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Gm10602-201ENSMUST00000098239 609 ntBASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RpgrQ9R0X5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms