Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 AC110285.5-201ENST00000611501 352 ntBASIC21.92■■□□□ 1.1
CHD7Q9P2D1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD7Q9P2D1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD7Q9P2D1 AC116050.2-201ENST00000612102 1779 ntBASIC21.91■■□□□ 1.1
CHD7Q9P2D1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 MMP23A-201ENST00000234610 1017 ntBASIC21.9■■□□□ 1.1
CHD7Q9P2D1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.9■■□□□ 1.1
CHD7Q9P2D1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.89■■□□□ 1.1
CHD7Q9P2D1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 AC010947.1-201ENST00000623454 693 ntBASIC21.89■■□□□ 1.09
CHD7Q9P2D1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD7Q9P2D1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 AC080038.3-201ENST00000623346 1952 ntBASIC21.88■■□□□ 1.09
CHD7Q9P2D1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 AC006557.6-201ENST00000623071 864 ntBASIC21.88■■□□□ 1.09
CHD7Q9P2D1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.88■■□□□ 1.09
CHD7Q9P2D1 C1orf229-201ENST00000623686 2258 ntBASIC21.88■■□□□ 1.09
CHD7Q9P2D1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 KRT18P22-201ENST00000402024 1347 ntBASIC21.87■■□□□ 1.09
CHD7Q9P2D1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD7Q9P2D1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.86■■□□□ 1.09
CHD7Q9P2D1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms