Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Gm22325-201ENSMUST00000158904 308 ntBASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl28Q9JIL2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccl28Q9JIL2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl28Q9JIL2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl28Q9JIL2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Gm18284-201ENSMUST00000172604 624 ntBASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 AV356131-201ENSMUST00000206201 750 ntBASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl28Q9JIL2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl28Q9JIL2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms