Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
ATP6V0A4Q9HBG4 ITM2C-210ENST00000620962 501 ntBASIC22.76■■□□□ 1.23
ATP6V0A4Q9HBG4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V0A4Q9HBG4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V0A4Q9HBG4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 KRT18P68-201ENST00000392293 1000 ntBASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 AC083880.1-201ENST00000608266 535 ntBASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 AL589743.5-201ENST00000616611 1050 ntBASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.75■■□□□ 1.23
ATP6V0A4Q9HBG4 AC121338.2-201ENST00000622535 1744 ntBASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 AC008687.6-201ENST00000596318 630 ntBASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 MYC-209ENST00000641252 345 ntBASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 AC007375.3-201ENST00000600936 2314 ntBASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 AC087633.2-202ENST00000565166 1439 ntBASIC22.74■■□□□ 1.23
ATP6V0A4Q9HBG4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 AC091874.3-201ENST00000512672 1195 ntBASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ATP6V0A4Q9HBG4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 DUSP5P2-201ENST00000426873 1033 ntBASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATP6V0A4Q9HBG4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 PGM5P4-201ENST00000421970 445 ntBASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 AC105020.6-201ENST00000621523 1217 ntBASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATP6V0A4Q9HBG4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms