Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Haglr-201ENSMUST00000100000 2085 ntBASIC17.94■□□□□ 0.46
Cdk9Q99J95 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.94■□□□□ 0.46
Cdk9Q99J95 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk9Q99J95 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk9Q99J95 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk9Q99J95 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk9Q99J95 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.9■□□□□ 0.46
Cdk9Q99J95 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk9Q99J95 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdk9Q99J95 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdk9Q99J95 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Cdk9Q99J95 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk9Q99J95 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.89■□□□□ 0.45
Cdk9Q99J95 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.89■□□□□ 0.45
Cdk9Q99J95 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.89■□□□□ 0.45
Cdk9Q99J95 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms