Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdhr1Q8VHP6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Gm6433-201ENSMUST00000118634 875 ntBASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Odf3b-204ENSMUST00000227834 930 ntBASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdhr1Q8VHP6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Gm3375-201ENSMUST00000203929 796 ntBASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdhr1Q8VHP6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdhr1Q8VHP6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdhr1Q8VHP6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdhr1Q8VHP6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdhr1Q8VHP6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdhr1Q8VHP6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Gm11539-201ENSMUST00000119837 557 ntBASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Gm13436-201ENSMUST00000120418 567 ntBASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdhr1Q8VHP6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms