Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.53■□□□□ 0.72
Sox30Q8CGW4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.53■□□□□ 0.72
Sox30Q8CGW4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.53■□□□□ 0.72
Sox30Q8CGW4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.53■□□□□ 0.72
Sox30Q8CGW4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox30Q8CGW4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.53■□□□□ 0.72
Sox30Q8CGW4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.53■□□□□ 0.72
Sox30Q8CGW4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox30Q8CGW4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sox30Q8CGW4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox30Q8CGW4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox30Q8CGW4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox30Q8CGW4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Sox30Q8CGW4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Gm10418-201ENSMUST00000100943 576 ntBASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox30Q8CGW4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox30Q8CGW4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.48■□□□□ 0.71
Sox30Q8CGW4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms