Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm10517-202ENSMUST00000192970 758 ntBASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Odf3b-204ENSMUST00000227834 930 ntBASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.32■□□□□ 0.36
Rdh1Q8CGV4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Gm3375-201ENSMUST00000203929 796 ntBASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rdh1Q8CGV4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rdh1Q8CGV4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Gm10418-201ENSMUST00000100943 576 ntBASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Gm30025-201ENSMUST00000218555 728 ntBASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rdh1Q8CGV4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Gm43799-201ENSMUST00000201845 579 ntBASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh1Q8CGV4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh1Q8CGV4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh1Q8CGV4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rdh1Q8CGV4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rdh1Q8CGV4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.27■□□□□ 0.35
Rdh1Q8CGV4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Fst-202ENSMUST00000223640 2612 ntBASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms