Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.67■□□□□ 0.26
Cpne1Q8C166 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Gm27275-201ENSMUST00000184318 272 ntBASIC16.67■□□□□ 0.26
Cpne1Q8C166 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Tgds-204ENSMUST00000228543 1594 ntBASIC16.67■□□□□ 0.26
Cpne1Q8C166 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne1Q8C166 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Gm11927-201ENSMUST00000118472 759 ntBASIC16.66■□□□□ 0.26
Cpne1Q8C166 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.66■□□□□ 0.26
Cpne1Q8C166 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Zfp783-201ENSMUST00000095946 670 ntBASIC16.66■□□□□ 0.26
Cpne1Q8C166 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne1Q8C166 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Gm38285-201ENSMUST00000192928 922 ntBASIC16.65■□□□□ 0.26
Cpne1Q8C166 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.65■□□□□ 0.26
Cpne1Q8C166 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne1Q8C166 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Gm11249-201ENSMUST00000117071 859 ntBASIC16.64■□□□□ 0.25
Cpne1Q8C166 Gm37856-201ENSMUST00000191634 999 ntBASIC16.64■□□□□ 0.25
Cpne1Q8C166 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne1Q8C166 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Gm10653-202ENSMUST00000139570 835 ntBASIC16.63■□□□□ 0.25
Cpne1Q8C166 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne1Q8C166 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.62■□□□□ 0.25
Cpne1Q8C166 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cpne1Q8C166 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne1Q8C166 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms