Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Samm50Q8BGH2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Samm50Q8BGH2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Samm50Q8BGH2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Samm50Q8BGH2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Samm50Q8BGH2 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Samm50Q8BGH2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Samm50Q8BGH2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Samm50Q8BGH2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.85■□□□□ 0.93
Samm50Q8BGH2 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.85■□□□□ 0.93
Samm50Q8BGH2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Samm50Q8BGH2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Samm50Q8BGH2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.83■□□□□ 0.93
Samm50Q8BGH2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.83■□□□□ 0.93
Samm50Q8BGH2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Samm50Q8BGH2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.82■□□□□ 0.92
Samm50Q8BGH2 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.82■□□□□ 0.92
Samm50Q8BGH2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Samm50Q8BGH2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms